Gene Information

Name : H650_00235 (H650_00235)
Accession : YP_008098264.1
Strain :
Genome accession: NC_021492
Putative virulence/resistance : Unknown
Product : transposase IS401
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 36008 - 36820 bp
Length : 813 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGCTGGATGTTCATCCCAGTGGTTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGGCAGACCTGAGACT
GACAGGACAGATTAAACAGTTCTGGCTGGAATCGGGATGCGTCTATGGTTATCGCAAAATCCATCTGGATCTGCGTGACA
GCGGGCAACAGTGCGGAGTAAACAGAGTCTGGAGACTGATGAAACGTGTCGGAATAAAGGCTCAGGTCGGATACCGAAGC
CCGCGGGCACGTAAAAGCGAGGCCAGTATCGTGTCACCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTCCTGATGA
GCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTTGTTGTTGATCTGTTCTCAC
GCAAAATTATCGGCTGGTCCATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCACTGCTGATGGCTGTATGGCGG
CGTAATCCCGAAAAACAGGTGCTGGTTCATTCGGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAA
ATCACACGGCCTGGAGGGTAGCATGAGCCGTCGCGGTAACTGCCATGATAATGCGGTTGCAGAAAGTTTTTTCCAGTTGT
TGAAACGTGAACGGATAAAGAAAAAGATCTACGGAACGCGGGAAGAAGCCCGCAGTGATATTTTTGATTACATCGAGATG
TTTTATAACAGTAAGCGTCGGCATGGTTCTAGCGATCAGATGTCACCGACAGAATATGAAAACCAGTATTATCAACGGCT
CGGAAGTGTCTAG

Protein sequence :
MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRS
PRARKSEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEM
FYNSKRRHGSSDQMSPTEYENQYYQRLGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 4e-41 46
tnpB CAB61574.1 transposase B Not tested HPI Protein 1e-43 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 9e-41 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-40 45
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 8e-43 44
unnamed AAC31485.1 L0006 Not tested LEE Protein 9e-29 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 1e-28 42
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-28 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 9e-30 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 9e-30 42
Z5089 NP_290241.1 transposase Not tested LEE Protein 1e-28 42
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 3e-29 42
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 3e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_00235 YP_008098264.1 transposase IS401 VFG0785 Protein 6e-29 42
H650_00235 YP_008098264.1 transposase IS401 VFG1484 Protein 1e-29 42