Gene Information

Name : H650_00560 (H650_00560)
Accession : YP_008098329.1
Strain :
Genome accession: NC_021492
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 100631 - 101158 bp
Length : 528 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAATAAAATCGGATTACTACTGCTCTGCGTAACAATGTCATGCAGCGCGGCTCCCCAGATGTGTTTTGATAAGGCCGG
GCGGGATTATAACATTGATCCATTACTGCTTATGTCAATTTCGATTAAAGAGAGCCGTCTTAAAGCCGATGCAGTGAATA
AAGCTAATAATGATGGTTCTGAGGATGTCTGCGGGATGCAGGTAAACAGTTCTCATTATAAGTCTTTGCGTAAATTCAAT
ATTACACGTTCGGACTTACTCAATGATCCATGCATATGTGTTTACAGCGGTGCATGGGTACTTGCACGAAATTTCAGGTC
TTACGGGAAAAACTGGGACAGTGTTGGAATATATAATACCGGCCCCGGTATAAAACTGCTGAAACAGCGCCGGGCGTATG
CCGATTCGATTAAAAACATTTACCGCATTCTGCTGGCAAGAAAGGATATTCTTTCGCAGCGTACCGGAAAGGATGAAACT
GACATGGCGGCAATGTCATTGCCGCCAGCGCGCCCGGTTAATGAATAA

Protein sequence :
MNKIGLLLLCVTMSCSAAPQMCFDKAGRDYNIDPLLLMSISIKESRLKADAVNKANNDGSEDVCGMQVNSSHYKSLRKFN
ITRSDLLNDPCICVYSGAWVLARNFRSYGKNWDSVGIYNTGPGIKLLKQRRAYADSIKNIYRILLARKDILSQRTGKDET
DMAAMSLPPARPVNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06358.1 unknown Not tested LEE Protein 3e-19 45
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 1e-18 43
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 1e-18 43
unnamed AAC31524.1 L0045 Not tested LEE Protein 2e-18 43
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 2e-18 43
unnamed AAK26704.1 unknown Not tested LEE Protein 9e-19 43
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 3e-18 43
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 3e-18 43
unnamed AAL57531.1 unknown Not tested LEE Protein 8e-19 43
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 8e-19 43
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 8e-19 43
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H650_00560 YP_008098329.1 hypothetical protein VFG0823 Protein 9e-19 43