|
Name : H650_00055 (H650_00055) Accession : YP_008098228.1 Strain : Genome accession: NC_021492 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuC Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 6078 - 7202 bp Length : 1125 bp Strand : + Note : binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGGTGACCCGTGGTTCAAAATTCGCGAGCAGCAGTTTCCAGAGCAACTATTTGTTTTCTCGAGTAATTATGAATTATA TGCCAGTCTGAGTAACCGCGTGATGGCCTGTCTGGAAGAGCTGACTCCAGGCGTGGAAGCATACTCAATCGACGAGATGT TCCTGGATCTCCGGGGGCTGGAAACCGCCATCAGTTATGAGGCATTCGGCACGCAGCTGCGCGAACATGTTTATGCCTGT ACCCGGCTCACTATCGGCGTCGGAATGGGTCCCACCAAGACACTGGCAAAATCAGCGCAGTGGGCGTCGAAGGAGTGGCC AGCGTTCAGGGGCGTGCTGGCGCTGACGCCAGGAAATCCCGCCCGCACAGCAAAGATGCTTTCACTTCAGCCTGTCCAGG AAATATGGGGGGTGGGCAGCCGTATCGCTCGAAAGCTTAACACAATGGGGATTACCACCGCACTTCAGCTGGCGCAGGCC AACACCGCTTTTATCCGTAAAAATTTTAATGTGGTGCTGGAACGCACCGTCCGGGAACTGAACGGTGAGAGCTGTATTGC GCTCGAGGAAGCTCCGCCACCGAAGCAGCAGATTGTATGTTCCCGGTCGTTTGGCGAGCGTATCACTACGTATGACTCCA TACGTCAGGCTGTCTGCCAGTACGCGGAGCGCGCCGCCGAAAAACTGCGGGGAGAACGCCAGTACTGCCGGCACATTTCA GTCTTTATCAAAACCTCCCCCTTCTCTGCCACTGAACCCTACTACGGCAACGTGGCAAGTGAAAAACTGCTTACGGCCAC GCAGGACACACGGGACATTATTGCAGCCGCTGTCCGCGCACTGGAGCGTATCTGGCGCGACGATCACCGGTATGCAAAGG CAGGGGTCATGCTTAATGACTTCAGCGGTTCCGGCATTGCCCAACTGAACCTGTTTGATGAGCAGCCTCCCCGCCCGCAC AGTCAGGAACTAATGAGTGTTGTTGACGGGATCAATCATTCCGGGCTTGGCCAGGTCTGGTTTGCCGGGCGTGGCATAGC CCCTCAGTGGAAAATGAAACGGGAAATGCTGAGCCCTGCTTACACGACACGCTGGAAAGAACTGCCCCTTGCCCGTATTG GCTGA Protein sequence : MGDPWFKIREQQFPEQLFVFSSNYELYASLSNRVMACLEELTPGVEAYSIDEMFLDLRGLETAISYEAFGTQLREHVYAC TRLTIGVGMGPTKTLAKSAQWASKEWPAFRGVLALTPGNPARTAKMLSLQPVQEIWGVGSRIARKLNTMGITTALQLAQA NTAFIRKNFNVVLERTVRELNGESCIALEEAPPPKQQIVCSRSFGERITTYDSIRQAVCQYAERAAEKLRGERQYCRHIS VFIKTSPFSATEPYYGNVASEKLLTATQDTRDIIAAAVRALERIWRDDHRYAKAGVMLNDFSGSGIAQLNLFDEQPPRPH SQELMSVVDGINHSGLGQVWFAGRGIAPQWKMKREMLSPAYTTRWKELPLARIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 1e-138 | 77 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 1e-138 | 77 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-59 | 43 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-60 | 42 |
