Gene Information

Name : L483_03760 (L483_03760)
Accession : YP_008092581.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 801838 - 802806 bp
Length : 969 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCACGACACTTCAGCCCACAGCAAGCCGCGTATCGCCATCAGCGCCTGCCTGACCGGGCACAGCGTGCGTTACAACGG
CGGCCATAAGGCCTCAGACCTGTGCCGTACGCAACTGGACGCCCATTTCGACTGGCTGCCGGTGTGCCCGGAAGTTGCCA
TCGGCCTGGGCATACCGCGCGACCCGATCCGCCTGGTCGGCAATCCCGAACGACCGGAAGTGGTCGGTACCCGTAACCCA
GGCATGGACCTGACCGGCCCGCTACGCAACTATGGCGAGCAGATGGCCGCCGAGCTCGACAGCATCTGCGGCTATATTTT
CATGCAGAAATCGCCCTCTTGCGGCCTGGAGCGGGTCAAGGTGTATCAGGACAATGGCCACCCGGCCATCCAGGGGGGGC
GCGGCGTGTATGCCCAAGCGTTCTGCGCAAGACGCCCGGACCTGCCTGTGGAAGAAGAAGGTCGCCTGCATGACCCGGTG
CTGCGCGAGAACTTCATCAGCCGCGTGTACGCCTACGCCGACTGGCAGCGCCTGCTGGCCGAGGGCCTTAGCCGTGGAAG
CCTGGTGCGCTTTCATTCGCGTTACAAATACCTGGTGATGGCCAACAACCCCCAGGCCTACCGCACCTTGGGCCGCCTGC
TCGGCAGCATGAGCAAGGATGACGACCCACAAACCATCGGCCCACGCTACTTCAGCCAGCTGATGCAGGCCCTGAGACGC
TGTGCCAGCCGCGGCACCCATTGCAATGTGCTGCAGCACATCAGCGGCTATTTCAAGGACAACCTCACGCAGCAAGACAA
AGCCGAGCTGCAGACAATCATCAGCCAGTACCAGCAAGGCGTGGTGCCGCTGGTGGTACCGCTGACCCTGCTCAAGCACC
ATTTGCGCAAGCATCCAGACCCGTACCTGCTGCAACAGGCCTACCTGCAGCCGCACCCGGAAAGTCTGGGCTTGCGCAAT
GCAGTCTGA

Protein sequence :
MHDTSAHSKPRIAISACLTGHSVRYNGGHKASDLCRTQLDAHFDWLPVCPEVAIGLGIPRDPIRLVGNPERPEVVGTRNP
GMDLTGPLRNYGEQMAAELDSICGYIFMQKSPSCGLERVKVYQDNGHPAIQGGRGVYAQAFCARRPDLPVEEEGRLHDPV
LRENFISRVYAYADWQRLLAEGLSRGSLVRFHSRYKYLVMANNPQAYRTLGRLLGSMSKDDDPQTIGPRYFSQLMQALRR
CASRGTHCNVLQHISGYFKDNLTQQDKAELQTIISQYQQGVVPLVVPLTLLKHHLRKHPDPYLLQQAYLQPHPESLGLRN
AV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 5e-59 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 5e-59 43
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 5e-59 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-59 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-59 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_03760 YP_008092581.1 hypothetical protein VFG0490 Protein 2e-59 43