|
Name : L483_32070 (L483_32070) Accession : YP_008098147.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : transposase IS66 Function : - COG functional category : - COG ID : - EC number : - Position : 6798198 - 6799706 bp Length : 1509 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGACACCGGAACAGCTGCGCGGCTTGGCCGAACAGGCTATGCAGTTGCTGTCCCAGGTCGACTCCATGAGCCAGAAAAT CCAACGCCTCGAAACGGTCAACGAGCAACTGGCTCATGAAATCGCCATCCTCAAGCGACACAAGTTCGCCAAGCGCAGCG AGCAACTGAGCCCCGACCAAGGCAGTCTGCTTGATGATCTGCTCGATACCGATATCGCAGCTATCGAAGCCGAGCTGAAG GCAGCCAATCCGCCGGCCGCACCGGCCGAGCCACGTCATAAGCCCAAGCGTGCACCACTGCCGCCGCAGTTTCCGCGAAC CGTGATCCGTCACGAACCAGAGAATACTCAGTGCGTGTGCGGCTGCCAGCTTCAGCGAATCGGCGAAGACGTCAGCGAGA AGCTCGATTACACTCCGGGCGTGTTCACAGTTGAGCGGCATGTGCGTGGAAAATGGACGTGCCGTCAGTGTGAAACACTG ATCCAGGCGCCTGTACCGGCCCAAGTGATCGACAAGGGCATCCCGACCGCAGGCCTTTTGGCCCACGTGATGGTGGCGAA GTTCGCCGACCATTTACCGCTGTACCGGCAGGAGAAGATTTTTGGTCGGGCCGGACTGCCCATCGCCCGTTCGACACTGG CGCAATGGATCGGACAGACCGGTGTGCAGCTCCAGCCTCTGGTCGATGCGCTGCGTGAGCATGTGTTGGCCCAGGGCGTG ATCCACGCCGATGAGACCCCGGTTCAGATGCTCGCACCAGGCGAAAAGAAAACCCACCGCGCTTACGTGTGGGCCTATAG CACCACGCCTTTCTCGGCCCTAAAGGCCGTGGTCTACGACTTCAGCCCCAGCCGTGCCGGCGAACATGCGCGTAACTTCC TGGGCACGTGGAACGGTAAGCTGGTCTGCGATGACTTCGCCGGCTACAAGGCCAGCTTCGAGCTGGGCATCACCGAAATC GGCTGCATGGCCCATGCACGCCGCAAATTCTTCGACCTGCATGCAGCCAATAAAAGCCAGTTGGCGGAGCAGGCGCTTCA CTCGATTGGCGGGTTGTATGAAGTCGAGCGACACGCCAAGGAAATGAGCGACGAAGCCCGCTGGCGATTACGTCAGGAAA CAGCGGTGCCCATCGCTGAAAAACTGCATGAGTGGATGTTGGCCCAACGCGAACTTGTGCCCGAGGGTTCGGCCACGGCC AAGGCCCTGGATTACAGCCTTAAACGCTGGGTAGCGCTGACGCGCTACCTGGAAGATGGTGCTGTGCCCATCGACAATAA CCAGATCGAGAATTTGATCCGGCCGTGGGCGCTTGGGCGCTCGAACTGGTTATTTGCCGGGTCGCTGCGCAGTGGAAAAA GGGCGGCGGCAATCATGAGCCTGATCCAGTCGGCGCGTATGAATGGGCACGATCCGTATGCCTATCTCAAGGATGTACTG ATGCGGCTTCCGACACAGCGGGCGAGCGAAATCACGCAATTACTCCCGCAGCATTGGATGCTTGCCTGA Protein sequence : MTPEQLRGLAEQAMQLLSQVDSMSQKIQRLETVNEQLAHEIAILKRHKFAKRSEQLSPDQGSLLDDLLDTDIAAIEAELK AANPPAAPAEPRHKPKRAPLPPQFPRTVIRHEPENTQCVCGCQLQRIGEDVSEKLDYTPGVFTVERHVRGKWTCRQCETL IQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLPIARSTLAQWIGQTGVQLQPLVDALREHVLAQGV IHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALKAVVYDFSPSRAGEHARNFLGTWNGKLVCDDFAGYKASFELGITEI GCMAHARRKFFDLHAANKSQLAEQALHSIGGLYEVERHAKEMSDEARWRLRQETAVPIAEKLHEWMLAQRELVPEGSATA KALDYSLKRWVALTRYLEDGAVPIDNNQIENLIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPYAYLKDVL MRLPTQRASEITQLLPQHWMLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EXB16 | ABD94703.1 | ISPpu14 transposase Orf3 | Not tested | ExoU island B | Protein | 5e-158 | 91 |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 0.0 | 86 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 6e-132 | 54 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 4e-64 | 42 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 3e-62 | 41 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 5e-70 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_32070 | YP_008098147.1 | transposase IS66 | VFG1513 | Protein | 2e-64 | 42 |
| L483_32070 | YP_008098147.1 | transposase IS66 | VFG1700 | Protein | 1e-62 | 41 |
