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Name : L483_31120 (L483_31120) Accession : YP_008097959.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : - COG ID : - EC number : - Position : 6598952 - 6600625 bp Length : 1674 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCACACCCCCGACAACCTGGAACTCGATCTGAAGCGCGTGCTTCAGGCCCTGCTCACCGATCAGTACCTACACGCCAA CGACACCCTGCAAGTACTCGAACACGCCGCCGCACAGCCCGCCGGCCACCCGCTGGAACACATCGCCGCCTGCTGCCTGG AAGACCGCCGGCAACCAGGCCGGCTGCTGGACGTGGACTACCTCTGCCAATGGCTGGCCGGCAAGGTCGGTCAGCCCTAC CTGCGTATCGACCCCATGCAACTCGACCTGCCGCAAGTCGCCGGCCTGGTATCCCCTGCTTTTGCCCAGCGCCACGGCAT CCTCATCGTCGCCGACGACCCCTCCGGCATCACCGTCGCCAGCGCCCAGCCCTACCAGAACGACTGGCAGGCAGACCTGG CCCGCAGCCTGGGTCGGCCGATCCGCCGCGTGCTGGCCAGCCCCACACAAATCCGCCAGTCAGGGCAGTCGTTTCACCAC TTGGCCCAGTCGGTAAAGGGCGCGCAGCACCAGCAATCGTCCAGCCTGGGCGACCTCGAACAGTGGCTGGAACTGGGCAT GCGCCAGACCGAGGCCAGCGCAGACGACGCGCACATCGTGCATATCGTCGACTGGCTGCTGCAATACGCCATTGAGCAGC GCGCCAGCGATATCCACCTGGAGCCACGACGCGACCAGGGCCAGTTGCGCTACCGCATCGATGGCCTGCTGCACACCGTG TATGCCTTCCCCGCCGGGGTCACCCTGGCGCTGGTCAGCCGCCTGAAACACCTTGGCCGCATGGACGTTGCAGAAAAGCG TCGGCCCCAGGACGGCCGCCTGCAAAGCCGGCTACCGGGTGGTGGTGAAGTGGAACTACGGCTGTCGACGCTGCCGACCC CGTTCGGCGAAAAGCTGGTACTGCGCGTGTTCGACCCACACAAACTGCACGAGAACTTCGACCACCTCGGCCTGGAGGGG CCGCAGCTGGCTCAGTGGCAAAGCCTGCTGCGCCAGCGCCAGGGCATCATCCTGGTCACCGGCCCCACCGGTTCCGGCAA GACCAGCACGCTGTACACCAGCCTCACACTGCTGGCCACGCCGCAGGTAAACGTGTGCACCATCGAAGACCCGATCGAAC GCCTGGAACCGGCCTTCAACCAGCTACAGGTGCAGCCCGCGCTGGACCTGGGTTTTGCCAGCGCCGTGCGGGCCATGCTG CGCCAGGACCCGGACATCATCATGATCGGCGAAATCCGCGACCGCGAAACGGCCCTGGTGGCGGTACAGGCGGCCCTGAC CGGGCACCTGGTCCTGTCGACCCTGCATACCAACGACGCCTGCGCGGCAATCACGCGCCTGCAAGAGCTGGGTGTGGCCG ACTACCTGATCAAGGCCACACTGGTCGGGGTCATGGCCCAGCGCCTGGTGCGTACGTTGTGCCCGGACTGTGGAGCGAAT CCTTCAGACACCTGCCGGACCTGCCGAGGCACAGGTTTTCATGGGCGCACGGGGTTGTTCGAACTGCTGCAGCCCAGTGA GAGCCTGCGTGCTTTGATTGGCCCGAACACCGATCTGACCCATTTACGGCGTCAGGCGCTGGCCGATGGCCTGGTTGACC TGCGCCGTTGCGGCGAGGCCAAAGTGGCTAGCGGGCAGACCCGTACCGAGGAAGTATTGCGTGTCTGCAACTGA Protein sequence : MHTPDNLELDLKRVLQALLTDQYLHANDTLQVLEHAAAQPAGHPLEHIAACCLEDRRQPGRLLDVDYLCQWLAGKVGQPY LRIDPMQLDLPQVAGLVSPAFAQRHGILIVADDPSGITVASAQPYQNDWQADLARSLGRPIRRVLASPTQIRQSGQSFHH LAQSVKGAQHQQSSSLGDLEQWLELGMRQTEASADDAHIVHIVDWLLQYAIEQRASDIHLEPRRDQGQLRYRIDGLLHTV YAFPAGVTLALVSRLKHLGRMDVAEKRRPQDGRLQSRLPGGGEVELRLSTLPTPFGEKLVLRVFDPHKLHENFDHLGLEG PQLAQWQSLLRQRQGIILVTGPTGSGKTSTLYTSLTLLATPQVNVCTIEDPIERLEPAFNQLQVQPALDLGFASAVRAML RQDPDIIMIGEIRDRETALVAVQAALTGHLVLSTLHTNDACAAITRLQELGVADYLIKATLVGVMAQRLVRTLCPDCGAN PSDTCRTCRGTGFHGRTGLFELLQPSESLRALIGPNTDLTHLRRQALADGLVDLRRCGEAKVASGQTRTEEVLRVCN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-60 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-60 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_31120 | YP_008097959.1 | type II secretion system protein E | VFG0182 | Protein | 6e-61 | 44 |
| L483_31120 | YP_008097959.1 | type II secretion system protein E | VFG2048 | Protein | 4e-61 | 42 |
