Gene Information

Name : L483_30835 (L483_30835)
Accession : YP_008097902.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Resistance
Product : Cd(II)/Pb(II)-responsive transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6540424 - 6540867 bp
Length : 444 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAGATCGGAGAACTGGCCAAAGCCACCGACTGCGCGGTGGAAACCATTCGCTACTACGAGCGTGAAAACCTGCTGCC
CGAGCCTGCCCGTACAGAAGGCAACTACCGGCTGTATACCCAGGCCCACGTGGAACGGCTGACCTTCATCCGCAACTGCC
GCACCCTGGACATGACCCTGGACGAAATCCGCAGCCTGCTACGCCTGCGCGACAGCCCCGACGACTCGTGCGGCAGCGTC
AATGCGCTGATCGACGAACATATCGAGCATGTGCAGGCGCGGATCGATGGCTTGGTGGCTTTGCAGGAGCAGCTGGTGGA
ACTGCGGCGGCGCTGCAACGCGCAGGGGAGCGAATGCGCGATCTTGCAGCAACTGGAGACGAACGGGGCGGTATCAGTGC
CGGACACCGAGCATTCGCATGTGGGACGCAGTCACGGGCATTGA

Protein sequence : 
MKIGELAKATDCAVETIRYYERENLLPEPARTEGNYRLYTQAHVERLTFIRNCRTLDMTLDEIRSLLRLRDSPDDSCGSV
NALIDEHIEHVQARIDGLVALQEQLVELRRRCNAQGSECAILQQLETNGAVSVPDTEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-36 55
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-32 50
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-32 50
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 3e-32 50
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-32 50
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-32 50
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-32 50
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-32 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_30835 YP_008097902.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0058 Protein 2e-64 97
L483_30835 YP_008097902.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0301 Protein 1e-34 58
L483_30835 YP_008097902.1 Cd(II)/Pb(II)-responsive transcriptional regulator BAC0682 Protein 5e-20 41