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Name : L483_30830 (L483_30830) Accession : YP_008097901.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Resistance Product : 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD Function : - COG functional category : - COG ID : - EC number : - Position : 6538088 - 6540340 bp Length : 2253 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAACCAGCCTGTCAGCCACGAACACAAGCATCCGCACGATCACGCCCATGGCGATGACGACCATGGGCACGCCGCCCA CGGCCACAGCTGCTGCGGGGCCAAAGCCGCGCCGGCGCTGGTGCAGCTGACTGAAACGGCCAGTGCCCAGGCACAGCTCA GCCGCTTCCGCATCGACGCCATGGACTGCCCGACCGAGCAGACCCTGATTCAGGACAAGCTGGGCAAGCTGGCCGGTATC GAGCAGCTGGAATTCAACCTGATCAACCGCGTACTGGGCGTGCGCCATACATTGGACGGCACTGGCGACATCGAGCGTGC CATCGACAGCCTGGGCATGAAGGCCGAGCCGCTTGGTGCCGAAGGCGACAGTACCGCCGCCGCGCCCCAACCGGCCAAGA CCCGCTGGTGGCCGCTGGCATTGTCGGGTGTTGCCGCCATCGCCGCCGAAATCGTGCACTTTGCGTCGCTGGCGCCGGAG TGGCTGGTGGCGGCATTGGCGCTGGCAGCCATTCTTGGTTGCGGCCTGGGCACCTACAAGAAGGGCTGGATTGCCCTGAA AAACCGCAACCTCAACATCAACGCGCTGATGAGCATCGCCGTCACCGGTGCTGTGCTGATCGGCCAGTGGCCGGAAGCGG CCATGGTGATGGTGCTGTTTACCGTTGCCGAGCTGATCGAAGCACGCTCGCTGGACCGCGCACGCAATGCCATCAGCGGG CTGATGCAGCTGACCCCGGACATGGCCACGGTGCAGCAGGCAGATGGCCAATGGCGCGAAGTGGAAGTGCGCGAAGTGGC CGTCGGCGCGTTGGTGCGGGTGCGCCCCGGCGAGCGCATCGGCCTGGATGGCGAAGTGACCAGTGGGCAATCCAGCGTCG ATCAGGCGCCGATCACCGGCGAAAGCTTGCCTGTGGAGAAGGCCGTAGGCGACAAGCTGTTCGCCGGCACCATCAACCAG GCGGGTGCGCTGGAGTTTCGCGTTACCGCTGGCGCAGGCCAATCGACCCTGGCGCGGATCATCAAGGCCGTGGAGGAAGC GCAAGGCGCGCGGGCGCCTACCCAGCGCTTCGTCGACCAGTTTTCGCGTATCTATACCCCGGTGGTGTTTGCCATCGCCC TGGCCGTGGCGGTGATCCCGCCGCTGTTCATGGCCGCAAGCTGGTTCGACTGGGTGTACCGCGCCCTGGTGCTGCTGGTG GTCGCGTGCCCGTGCGCCCTGGTCATCTCGACCCCGGTGACCATCGTCAGCGGGCTGGCCGCTGCTGCGCGCAAAGGCAT CCTGATCAAGGGCGGTGTGTACCTGGAAGGCGGCCGCCGCCTGGATTACCTGGCCCTGGACAAGACCGGCACCATCACCC ACGGCAAGCCGGTACAGACCGACGCCAAAGTACTGGAGCCGGTGTTCGAAGGCCGTGCGCAAGCCCTGGCTGCCAGCTTG GGCGAACGTTCGGACCACCCGGTTTCCCGCGCCATTGCCCAGTTCGGCAAGGCGCAAGGCCTGGCCTTGAGCGAGGTCGA TGACTTCGCTGCCCTGGCCGGGCGCGGCGTGCGTGGCACCATCGCTGGCGAGGTCTACCACCTGGGCAACCACCGCCTGG TGGAAGAACTGGGGCTGTGCTCACCCGAGCTGGAAGCCCAGCTGGATGCGCTGGAGCGCCAAGGCAAGACCGTGGTCCTG CTGCTTGACCGCAGTGGCCCGCTGGCCCTTTTTGCAGTGGCCGATACGGTCAAGGACAGCAGCCGCCAGGCCATTGCCGA GCTGCATGAGCTGGGCATCAAGACTGTCATGCTGACCGGTGATAATCCGCATACCGCGCAGGCCATCGCCGCCGTGGTGG GTATTGACCGCGCGGAGGGCAACCTGCTGCCTGCCGACAAACTGAAAACCATCGAAGCCTTGTACGCACAGGGCCATCGG GTGGGCATGGTCGGTGACGGCATCAACGATGCCCCGGCCCTGGCCCGTGCCGAGATCGGTTTTGCCATGGCCGCTGCCGG CACCGACACCGCCATCGAAACCGCCGATGTGGCACTGATGGACGACGACTTGCGGAAAATCCCGGCCTTCGTCAGGCTGT CGCGCCAAAGTGCGGCGATCCTCATGCAGAACATCGTTCTGGCGTTGGGCGTCAAGGCGATATTCCTGGCGATTACCTTT GCCGGCATGGCCACCCTGTGGATGGCGGTGTTCGCCGACATGGGCGTGAGCCTGCTGGTGGTGTTCAACGGCTTGCGCCT TTTGCGCAAATAG Protein sequence : MNQPVSHEHKHPHDHAHGDDDHGHAAHGHSCCGAKAAPALVQLTETASAQAQLSRFRIDAMDCPTEQTLIQDKLGKLAGI EQLEFNLINRVLGVRHTLDGTGDIERAIDSLGMKAEPLGAEGDSTAAAPQPAKTRWWPLALSGVAAIAAEIVHFASLAPE WLVAALALAAILGCGLGTYKKGWIALKNRNLNINALMSIAVTGAVLIGQWPEAAMVMVLFTVAELIEARSLDRARNAISG LMQLTPDMATVQQADGQWREVEVREVAVGALVRVRPGERIGLDGEVTSGQSSVDQAPITGESLPVEKAVGDKLFAGTINQ AGALEFRVTAGAGQSTLARIIKAVEEAQGARAPTQRFVDQFSRIYTPVVFAIALAVAVIPPLFMAASWFDWVYRALVLLV VACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEGGRRLDYLALDKTGTITHGKPVQTDAKVLEPVFEGRAQALAASL GERSDHPVSRAIAQFGKAQGLALSEVDDFAALAGRGVRGTIAGEVYHLGNHRLVEELGLCSPELEAQLDALERQGKTVVL LLDRSGPLALFAVADTVKDSSRQAIAELHELGIKTVMLTGDNPHTAQAIAAVVGIDRAEGNLLPADKLKTIEALYAQGHR VGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFVRLSRQSAAILMQNIVLALGVKAIFLAITF AGMATLWMAVFADMGVSLLVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 68 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 8e-106 | 48 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 6e-108 | 42 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 5e-108 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_30830 | YP_008097901.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD | BAC0298 | Protein | 0.0 | 68 |
| L483_30830 | YP_008097901.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD | BAC0461 | Protein | 4e-77 | 44 |
| L483_30830 | YP_008097901.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD | BAC0455 | Protein | 3e-76 | 42 |
| L483_30830 | YP_008097901.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD | BAC0124 | Protein | 2e-62 | 42 |
| L483_30830 | YP_008097901.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD | BAC0092 | Protein | 4e-70 | 41 |
