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Name : L483_29760 (L483_29760) Accession : YP_008097687.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 6279996 - 6281876 bp Length : 1881 bp Strand : - Note : catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Hom DNA sequence : ATGACCAAACAAGAAAAAGCGATCAACCTCAGCGAATCGGCACAAGTCGATCAGCAGTCCGTGCAACCGTTCCCGCGCTC GCGCAAAATCTATGTCGAAGGCTCGCGGCCGGACATTCGCGTGCCCATGCGTGAAATCAGCCTGGACGATACCCCGACCG ATTTCGGTGGCGAGACCAACGCGCCGGTACTGGTCTACGACACGTCGGGCCCGTACACCGACCCCAACGTCATCATCGAC GTGCGCAAGGGCCTGGCCGACGTGCGTTCGGCGTGGATCGAGGCCCGCGGCGACACCGAGCGCCTGGGCGGGCTCAGCTC CGACTTTGGCCAGCAGCGCCTGAACGACGCCGAACTGGCCAAGCTGCGTTTCGCCCACGTGCGCAACCCGCGCCGTGCCA AGGCCGGCGCCAACGTCTCGCAGATGCACTATGCCCGCCAGGGCATCATCACCGCCGAGATGGAATATGTAGCCATCCGC GAAAACATGAAGCTGCAAGAAGCCCGCGCCGCTGGCCTGCTTAACGAGCAGCACGCCGGCCACAGCTTCGGTGCCAACAT CCCGAAAGAAATCACCCCCGAATTCGTCCGCCAGGAAATCGCCCGCGGGCGCGCGATCATCCCGGCCAACATCAACCACC CGGAGGTGGAGCCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGTGCCCTGGGGTCC TCGATCGAGGAAGAAGTGGCCAAGCTGACCTGGGGCATTCGCTGGGGTTCGGACACGGTCATGGACCTGTCCACCGGCAA GCACATTCACGAAACCCGTGAGTGGATCATTCGCAACTCGCCGGTGCCAATCGGTACCGTGCCGATCTACCAGGCCCTGG AAAAGGTCAATGGCGTGGCCGAGGACCTGACTTGGGAACTGTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTG GACTACTTCACCATCCACGCGGGGGTGCTGCTGCGCTATGTGCCGCTGACCGCCAAGCGCGTCACCGGTATCGTCAGCCG CGGTGGCTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAGGAAAACTTCCTCTACACGCACTTCGACGAAATCTGCG AAATCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGTGATGGCCTGCGCCCTGGCTCGATCGCCGATGCCAACGACGCC GCGCAGTTCGGTGAACTGGAAACCCTCGGCGAGCTGACCAAAATCGCCTGGAAGCACGACGTGCAGTGCATGATCGAAGG CCCTGGCCACGTACCGATGCAGCTGATCAAGGAGAACATGGACAAGCAGCTGGAGTGCTGCGACGAGGCGCCGTTCTACA CCCTCGGCCCACTGACCACCGACATTGCCCCGGGCTACGACCACATCACCTCGGGCATCGGTGCGGCGATGATCGGCTGG TTCGGTTGCGCCATGCTCTGCTACGTCACGCCCAAGGAACACCTGGGCCTGCCGAACAAGGATGACGTCAAGACCGGCAT CATCACCTACAAGATCGCCGCGCACGCCGCCGACCTTGCCAAGGGTCACCCCGGCGCGCAGATTCGCGACAACGCCCTGT CCAAGGCGCGTTTCGAGTTCCGTTGGGAGGACCAGTTCAACCTGGGTCTGGACCCGGACACTGCCCGTGCCTTCCACGAC GAGACCCTGCCGAAGGAATCGGCCAAGGTGGCGCACTTTTGCTCGATGTGCGGGCCAAAGTTCTGCTCGATGAAAATCAC CCAGGAAGTGCGTGAATACGCCGCCAAGATCGAGGCCGTGGATGTAACGGTCGAGCAAGGTATGCGCGAGCAGGCCGAGC GTTTCCGCCAGGAAGGCAGCCAGCTGTACCACAAAGTGTAA Protein sequence : MTKQEKAINLSESAQVDQQSVQPFPRSRKIYVEGSRPDIRVPMREISLDDTPTDFGGETNAPVLVYDTSGPYTDPNVIID VRKGLADVRSAWIEARGDTERLGGLSSDFGQQRLNDAELAKLRFAHVRNPRRAKAGANVSQMHYARQGIITAEMEYVAIR ENMKLQEARAAGLLNEQHAGHSFGANIPKEITPEFVRQEIARGRAIIPANINHPEVEPMIIGRNFLVKINGNIGNSALGS SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWELFRDTLIEQAEQGV DYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDA AQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAFHD ETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAAKIEAVDVTVEQGMREQAERFRQEGSQLYHKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 78 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 78 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
