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Name : ribD (L483_02705) Accession : YP_008092383.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase Function : - COG functional category : - COG ID : - EC number : 1.1.1.193 Position : 578977 - 580107 bp Length : 1131 bp Strand : + Note : riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a DNA sequence : ATGCCCAGCCAAGCCGCCATCCTTGACGCCCACTACATGGCCCGCGCGCTGCAGCTGGCGCGTAAGGGCGTGTACACCAC CCACCCCAACCCGCGCGTAGGTTGCGTGATCGTACGCGATGGCGAAGTGGTGGGCGAAGGCTGGCATGTGCGTGCTGGCG AGCCACATGCCGAGGTGCATGCCCTGCGCCAGGCCGGTGAGCGTGCCCGTGGCGCCTGTGCATACGTTACCCTCGAGCCG TGCAGCCACCATGGCCGCACGCCGCCGTGCGCCGAAGCACTGGTGAAGGCTGGCGTAGCGCGGGTGGTGGCAGCCATGCA GGACCCTAACCCGCAAGTGGCGGGGCAGGGCCTGCGGCGCCTGGCCGAGGCTGGCATCGAAGTGGCCAGTGGCGTGCTCG AAGCCGAGGCCCGCGCGCTCAACCCAGGCTTTCTCAAGCGTATGGAACACGGCCTGCCGTTCGTGCGCGCCAAGCTGGCC ATGAGCCTGGATGGCCGCACCGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCGGCCCCGCTGCCCGTTCGGCGGTGCA GCGCCTGCGTGCCCGTGCCAGCGTGGTGCTGACCAGCGCTGCCAGTGTGCTGGCCGACAATGCGCGCATGACCGTACGTG GCGCCGAGCTGGGCCTGGACGCCGAAACCACCGCCTTGGCACTCAGCCGCACCCCGCTGCGAGTGCTGGTCGATGGCCGC CTGCGCCTGCCACTGGCTGCGCCGTTCTTCCTGGCCGGCCCGGCACTGGTGGTGACCGCTGTCGCAGATGACCCGCGCTA TGCCGCTGCCGGCCACGAACTGCTCAGCTTGCCGGGCGACAATGGCCAGGTCGACCTTGCGGCGCTGTTGCAGGCCCTGG CCGCCCGCGGCGTCAACGAAATCCTCCTGGAAGCCGGTGCCGGCCTGGTCGGCGCCTTTGCCCGCCAAGGCCTGGTCGAC GAGTATCAGCTGTTCGTCGCTGGCACCTTCCTCGGCTCCGACGCCCGCCCATTGCTGGAGTGGCCGCTGGACAAGATGAG CGAAGCGCCGCGATTGAAAATTACCGAAATGCGCGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCCCTGCCGGCGC CCGGCGTATAA Protein sequence : MPSQAAILDAHYMARALQLARKGVYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGERARGACAYVTLEP CSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAKLA MSLDGRTAMASGESQWITGPAARSAVQRLRARASVVLTSAASVLADNARMTVRGAELGLDAETTALALSRTPLRVLVDGR LRLPLAAPFFLAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLAALLQALAARGVNEILLEAGAGLVGAFARQGLVD EYQLFVAGTFLGSDARPLLEWPLDKMSEAPRLKITEMRAVGDDWRVTAIPLPAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 8e-59 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 8e-59 | 48 |
