Gene Information

Name : L483_26840 (L483_26840)
Accession : YP_008097113.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5689281 - 5689964 bp
Length : 684 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCGCATTCTTTTGGTTGAAGACAACCGCGATATCCTGGCCAACCTGGCCGATTATCTGGGCATGAAGGGCTATACCGT
CGACTGCGCCCAGGACGGCCTGTCCGGCCTGCACCTGGCGGCCACCGAACACTACGACCTGATCGTGCTGGACATCATGC
TGCCCGGCATCGATGGCTACACCCTCTGCAAGCGCTTGCGTGAGGACGCCCGCCGCGACACGCCGGTGATCATGCTTACC
GCCCGCGACCAGCTGGACGACCGCCTGCAAGGCTTCCGCTCCGGTGCCGACGACTACCTGCTCAAGCCGTTCGCCCTGTC
GGAGCTGGCGGCCCGCATCGAAGCGGTGCTGCGCCGTGCCCAGGGCGGTGGGCGCCGCACGCTGCAGGTGTCCGACCTCA
GCTACGACCTCGACACCCTGGAGGTTACCCGTCAGGGGCGCTTGCTCAAGCTCAACCCGGTCGGTCTCAAGCTGCTGGCA
GTGCTGATGCAGAAAAGCCCGCACGTACTGCGCCGCGAAGTGCTGGAAGAGGCTTTGTGGGGCGACGACTGCCCTGACAG
CGACAGCCTGCGCAGCCATGTACACCAGCTGCGCCAGGTGATCGACAAACCGTTTGAAAAACCGTTGCTGCATACCGTCC
ATGGCGTCGGCTATCGCCTCGCCGAGGGTCGCGATGGAGTTTAA

Protein sequence : 
MRILLVEDNRDILANLADYLGMKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYTLCKRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLLKPFALSELAARIEAVLRRAQGGGRRTLQVSDLSYDLDTLEVTRQGRLLKLNPVGLKLLA
VLMQKSPHVLRREVLEEALWGDDCPDSDSLRSHVHQLRQVIDKPFEKPLLHTVHGVGYRLAEGRDGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_26840 YP_008097113.1 XRE family transcriptional regulator BAC0197 Protein 3e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_26840 YP_008097113.1 XRE family transcriptional regulator VFG0596 Protein 1e-33 42
L483_26840 YP_008097113.1 XRE family transcriptional regulator VFG1390 Protein 3e-31 41