Gene Information

Name : L483_23125 (L483_23125)
Accession : YP_008096387.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4838524 - 4839219 bp
Length : 696 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGCCAGTCCGCCACGCTGTTGGTCATCGACGATGAACCGCAGATCCGCAAGTTCCTGCGCATCAGCCTGGCCTCGCA
GGGCTACAAGGTGCTCGAAGCTGCTACCGGCCAGGAAGGGCTGGCCCAGGCTGCTCTGGGCAAGCCGGACCTGGTGGTGC
TCGACCTGGGCCTGCCGGACATGGACGGCCAGCAGGTGCTGCGAGAGCTGCGCGAATGGAGCGCGGTGCCGGTGATGGTG
CTGTCGGTGCGCGCCAGTGAGGTGCAGAAGGTGGATGCGCTGGACGGCGGGGCCAACGATTACGTGACCAAGCCGTTTGG
CATCCAGGAATTTCTGGCGCGGGTGCGGGCCTTGCTACGCCAGGTGCCACAGGCCGGGGGCTCGGAAGTGGCAGCCAGCT
TTGGGCCGTTGACCGTGGATTTTGCCTTTCGCCGGGTAACCCTCGACGGTGTGGAGGTGGCGTTGACGCGCAAGGAGTAT
GCCTTGCTGGCGCTATTGGCCGGGCACCCAGGGCGGGTGATTACCCAGCAGCAACTGCTCAAGGATGTCTGGGGGCCTAC
CCATGTGGAGAATACCCACTACCTTCGGATCGTGGTCGGGCATCTTCGGCAGAAGCTGGGCGATGACCCCACGGCGCCAC
GGTTTATCATCACCGAGGCAGGGGTGGGGTACAGGTTGGTGGCGCCGCCCATCTAA

Protein sequence :
MSQSATLLVIDDEPQIRKFLRISLASQGYKVLEAATGQEGLAQAALGKPDLVVLDLGLPDMDGQQVLRELREWSAVPVMV
LSVRASEVQKVDALDGGANDYVTKPFGIQEFLARVRALLRQVPQAGGSEVAASFGPLTVDFAFRRVTLDGVEVALTRKEY
ALLALLAGHPGRVITQQQLLKDVWGPTHVENTHYLRIVVGHLRQKLGDDPTAPRFIITEAGVGYRLVAPPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 4e-32 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 3e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_23125 YP_008096387.1 Fis family transcriptional regulator VFG1390 Protein 2e-30 42
L483_23125 YP_008096387.1 Fis family transcriptional regulator VFG1389 Protein 2e-26 42