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Name : L483_23100 (L483_23100) Accession : YP_008096382.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : microcin C ABC transporter ATP-binding protein YejF Function : - COG functional category : - COG ID : - EC number : - Position : 4829220 - 4830827 bp Length : 1608 bp Strand : + Note : with YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTGCGGGACCTGGCAGTGGAGTTCGTGACCGGGGACCAGATCAACCGGGTGGTAGA CGGCATCAGCTTCGATATCCGCAAAGGCGAGACACTGGCGCTGGTGGGCGAAAGCGGCTCGGGCAAATCGGTCACCGCGC ACTCGATCCTGCGCCTGCTGCCCTACCCCCTGGCCCGCCACCCCAGCGGCAGCATCCGTTACCAGGACAAGGACCTGCTG CAGCAGAACGAGAAGACCTTGCAGCGAATCCGAGGCAACCGCATCGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAA CCCGCTGCACTGCATCGAGAAGCAGATCAACGAAATCCTTTTGCTGCACAAGGGCCTGAGCGGCAAGGAAGCGACCGCTC GCACCCTGGAGCTACTGGATCTGGTCGGCATTCCCGAGCCGCACAAGCGCTTGAAGGCCCTGCCCCATGAGCTGTCGGGC GGGCAACGCCAACGGGTGATGATCGCCATGGCACTGGCCAACGAGCCTGAACTGCTGATTGCAGATGAGCCGACCACGGC GCTCGACGTGACCGTGCAGTTGAAAATTCTCGACCTGCTCAAGGAACTGCAGGCGCGCCTGGGCATGGCGCTGCTGCTGA TCAGCCATGACCTGAACCTGGTGCGTCGCATCGCCCACCGCGTGTGCGTGATGCAGCGCGGGCAAATTGTCGAGCAAGCC GAATGTGCCACGCTGTTCAGCGCGCCACAGCACCACTACACACAGATGCTGATCAATGCTGAGCCCAGCGGGCTGCCGGC CCACAACCCGGTCGGCGCGCCACTGCTGGAGGTGGATGATCTCAAGGTGTGGTTCCCGATCAAGAAGGGGCTGCTGCGGC GCACGGTTGACCATGTAAAGGCCGTGGACGGGGTCAACTTCAGCTTGCCCCAAGGGCAAACGCTGGGGATTGTCGGGGAG TCCGGGTCGGGCAAGTCAACGCTCGGTCTGGCGATCCTGCGGCTGATTTCCAGCCAGGGAGGCATCCGTTTCCATGGGCA GGACTTGCAAGGGCTGAACCAGAAGGCCGTGCGGCCGCTGCGGCGGGAAATGCAGGTGGTGTTCCAGGATCCGTTTGGCA GCCTGAGCCCGCGTATGTGCGTGGCGGACATTGTGGGCGAAGGGCTGCGCATTCACGGCATTGGCACCGCGCAGGAACAG GAAGCAGCGATTATCGCGGCCCTGGAGGAGGTAGGCCTGGACCCCCGCACACGCCACCGCTACCCCCATGAGTTTTCCGG CGGCCAGCGCCAGCGCATCGCCATTGCCCGGGCGCTGGTGTTGAAACCAGCACTGATTCTGCTGGATGAACCCACGTCAG CGCTGGACCGTACCGTGCAGCGGCAGGTGGTCGAGTTGCTGCGCAGTCTGCAGCAGAAGTACAACCTGACCTACCTGTTC ATCAGCCATGACCTGGCGGTGGTCAAGGCGCTGAGCCACCAGTTGATGGTGATCAAGCATGGGCAGGTGGTTGAACAAGG GGATGCGCAGGCGATCTTCCATGCGCCGCAGCACCCGTACACGCGACAGTTGCTGGAGGCGGCGTTTTTAGAGGTTGAAG TTTCGTAG Protein sequence : MSEQNLIEVRDLAVEFVTGDQINRVVDGISFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYQDKDLL QQNEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLSGKEATARTLELLDLVGIPEPHKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA ECATLFSAPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGLLRRTVDHVKAVDGVNFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQDLQGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHGIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQQKYNLTYLF ISHDLAVVKALSHQLMVIKHGQVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVEVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-76 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-98 | 42 |
