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Name : L483_23045 (L483_23045) Accession : YP_008096371.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 4815909 - 4818158 bp Length : 2250 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTACAAGGACCTCAAGTTCCCGATCCTCATCGTCCACCGCGCCATCAAGGCCGACAGTGTCGCTGGCGAGCGCGTGCG GGGTATCGCCGAGGAACTGCGCCAGGATGGCTTCGCCATTCTCGCCGCCGCTGACCACGCCGAAGCCCGTCTGGTCGCCG CCACTCACCACGGCCTGGCCTGCATGCTGATCGCTGCCGAAGGCGTTGGGGAGAATACCCACCTGCTGCAGAACATGGCC GAACTGATCCGCCTGGCCCGCCTGCGCGCACCCTATCTGCCGATTTTCGCCCTGGGTGAGCAGGTAACCCTGGAAAACGC CCCCGCCGAAGCCATGAGCGAGCTTAACCAGCTGCGTGGCATTCTTTACCTGTTCGAAGACACCGTGCCGTTCCTCGCCC GCCAGGTGGCGCGTGCCGCACATACCTACCTTGACGGCTTGCTGCCGCCGTTTTTCAAAGCCTTGGTGCAGCATACCGCG CAGTCCAACTATTCTTGGCACACCCCGGGCCACGGCGGTGGCGTGGCCTACCACAAAAGCCCGGTGGGCCAGGCGTTTCA TCAGTTCTTCGGGGAAAACACCCTGCGCTCGGACCTCTCCGTATCCGTGCCGGAACTCGGCTCGCTGCTCGACCACACCG GCCCCTTGGCCGAGGCTGAAGCCAGGGCGGCGCGTAACTTCGGTGCTGACCACACCTTCTTCGTCATCAATGGTACTTCC ACGGCCAACAAGATCGTCTGGCACGCCATGGTCGGCCGTGACGACCTGGTGCTGGTGGACCGCAACTGCCACAAGTCGGT GGTTCACGCAATTATCATGACTGGCGCCGTTCCGCTGTACCTGTGCCCGGAGCGCAACGAGCTGGGTATCATCGGCCCGA TCCCGCTCAGCGAATTCAGCCCCGAGGCTATCGAGGCGAAGATCCAGGCCAACCCCCTTGCCCGTGATCGCGGGCGGCGC ATCAAGCTGGCGGTGGTGACCAACTCCACCTACGACGGGCTGTGTTACCACGCCGGGATGATCAAGCAGTGCTTGGGTGC GAGTGTGGAGGTGCTGCACTTCGACGAAGCCTGGTTTGCCTATGCGGCGTTTCATGATTTCTTCACCGGGCGCTATGCCA TGGGCACGGCCTGCACGGCGGGCAGCCCGCTGGTGTTCAGTACCCATTCCACCCACAAATTGCTGGCCGCGTTCAGCCAG GCCTCGATGATCCATGTGCAGGACGGGGCCAGGCGGCAACTGGACCGAGACCGCTTCAACGAAGCGTTCATGATGCATAT CTCGACCTCGCCGCAGTACAGCATCCTTGCCTCGCTGGATGTAGCCTCGAGCATGATGGAAGGGCCGGCGGGGCATTCAC TGCTGCAAGAGATGTTCGACGAAGCGTTGAGTTTTCGTCGTGCCCTGGCCAACTTGCGCGAGCACATTGCTGCGGATGAC TGGTGGTTCAGTATCTGGCAGCCGCCGGGCACCGAAGGTATCCAGCGCCTGGCCGCGCAGGACTGGTTGCTGCAACCGGG TGCCGAGTGGCATGGCTTTGGCGAAGTGGTGGACGACTACGTGCTGCTCGACCCGCTCAAGGTCACATTGGTAATGCCGG GCCTGAGTGCGGGTGGTGTGCTGGGCGAGCATGGCATCCCGGCGGCGGTGGTCAGCAAATTTCTCTGGGAGCGGGGGCTG GTGGTGGAGAAAACCGGCCTGTACAGCTTCCTGGTGCTGTTTTCCATGGGCATTACCAAAGGCAAGTGGAGCACTTTGCT GACGGAGTTGCTGGAATTCAAACGCCACTATGATGGCAACACAGCCCTGAGCAGTTGTCTGCCGAGCGTGGTGGCAGCTG ATGCTTCACGCTACCAGAGGATGGGGTTGCGCGACCTGTGTGACCAGTTGCATGACTGCTACCGCGCCAATGCCACGGCC AAGCAACTGAAGCGGCTGTTCACGCGTTTGCCGGAGGTGGCCGTGAGCCCGGCCCGTGCCTATGACCAGATGGTGCGTGG GGACGTGGAGGCGGTGCCGATCGAGGCGCTGCTGGGGCGTGTGGCAGCGGTGATGCTGGTGCCGTATCCGCCCGGTATTC CATTGATCATGCCGGGCGAGCGGTTCACCGAGGCGACCCGCTCGATACTCGACTACCTGGCCTTCGCCCGGGCATTCAAC CAGGGCTTCCCCGGTTTTGTCGCCGACGTGCATGGCCTGCAGAACGAGAGCGGCCGTTACACCGTGGACTGCATCACGGA ATGCGAATGA Protein sequence : MYKDLKFPILIVHRAIKADSVAGERVRGIAEELRQDGFAILAAADHAEARLVAATHHGLACMLIAAEGVGENTHLLQNMA ELIRLARLRAPYLPIFALGEQVTLENAPAEAMSELNQLRGILYLFEDTVPFLARQVARAAHTYLDGLLPPFFKALVQHTA QSNYSWHTPGHGGGVAYHKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS TANKIVWHAMVGRDDLVLVDRNCHKSVVHAIIMTGAVPLYLCPERNELGIIGPIPLSEFSPEAIEAKIQANPLARDRGRR IKLAVVTNSTYDGLCYHAGMIKQCLGASVEVLHFDEAWFAYAAFHDFFTGRYAMGTACTAGSPLVFSTHSTHKLLAAFSQ ASMIHVQDGARRQLDRDRFNEAFMMHISTSPQYSILASLDVASSMMEGPAGHSLLQEMFDEALSFRRALANLREHIAADD WWFSIWQPPGTEGIQRLAAQDWLLQPGAEWHGFGEVVDDYVLLDPLKVTLVMPGLSAGGVLGEHGIPAAVVSKFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRHYDGNTALSSCLPSVVAADASRYQRMGLRDLCDQLHDCYRANATA KQLKRLFTRLPEVAVSPARAYDQMVRGDVEAVPIEALLGRVAAVMLVPYPPGIPLIMPGERFTEATRSILDYLAFARAFN QGFPGFVADVHGLQNESGRYTVDCITECE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 1e-126 | 42 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 7e-124 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| L483_23045 | YP_008096371.1 | lysine decarboxylase | VFG1670 | Protein | 8e-127 | 42 |
