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Name : L483_22340 (L483_22340) Accession : YP_008096234.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : integrating conjugative element relaxase Function : - COG functional category : - COG ID : - EC number : - Position : 4659603 - 4661321 bp Length : 1719 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAGCGCTGGTGGTTCAAGCATGAAAAAGGCAATGCTGCGGAGCCCATACTCGCTCCAGCGCCCGAGGGATTTCTCCT CCCACTACTCGCCGAATCCCTGCTCTGTGCCGACCACCGGAAAAAGTTGCTGCAGCGCATCTGGCAATACACGGCGCTCT CCGAGCCGCAGTTCAATCAGCTCTACCTTGACCCGATCCACCGCTACGCCAGCTATGTACAGCAACTCCCCGCCAGCGAA AGCCACCACCATGCCTATCCGGGCGGCATGCTGGACCATGGACTGGAACTGGTGGCCTGCAGTTTGAAGCTGCGCCAGTC GTACCTGCTACCCAGCGGCGCCGCACCGGAAGACCAGGCCGCCCAGGCCGACGCCTGGAGCGCGGCGATTGCCTACGGCG CCCTGCTTCACGACATTGGTAAGATTGCCGTCGACCTGCAGGTCGAGTATGAAAATGGTGAGGTGTGGCACCCCTGGCAC GGTCCTCTGACCCTGCCCTACCGCTTTCGCTACGTAGCCGGCCGCGATTACAAGCTTCACGGCGCCGCCACCGGGCTGCT GTACACACAAGTTTTGACATCCCGTCAGCTTGACTGGCTCAGCAACTATCCAATCCTGTGGGGACACCTACTGTTCCTGC TGGCCAATCACTACGAGCACGCCGGCACCCTCGGGGAACTGGTGCTACAAGCTGACCGGGTCTCCACCGCGCAGAACATC GGCGCCAATCCCACCAAAGCCCTGCAGGCACCCAAACATTCGTTGCAGCATCACCTACTCACAGGCCTGCGTCACCTGGC CAAAAAAGAGTTCAAATTCAACCAGCCCGGCGCGGCTGGCTGGCTTACCCAAGACCATCTGTGGCTGGTCAGCAAGACCG CCACCGACAAACTGCGCGCTTACCTGCTCGCCCAGGCAGTGGATGGCATCCCCTCCTCCAACATTGCCTTGTTCGATGAG CTGCAGTCGCATGGACTGGTGGATGTGACACCAGAGGGCAAAGCGGTGTGGAGCGCCACCGTTTCAGAGGATGACTGGCA ACATCGCTTTACCTTTCTTCGCCTGCAGCCGAGCCTGATCTGGGCCAATGAGCCGAGGCCAGATTACTTTAGCGGCACGG TAGAGCCGATGATGGATGGCCCACTACCGACCAGCGAAACCAACGAGTCGGCCCCGGATCAGCCGCCTGCAACACCAGAA GCAAAACAAGCCGGCGCCGTGCTGCAGAATCAGGAATTCGACTACCTCGACGACCTTATGGACATGTTGCAAGTGCAGGG CGAACGCGAGAGTGGATCAGCTGTTGAGATGGCTCAATCTGCCACTCCTCCACCACAGTATTCCGTGGGGCAGGCCTTTA TCGAGTGGCTGCGCGAGGGAGTTAACAGTCATCGCTTAGTGATCAACGACAGTAAGGCCAAGGTCCATACGGTGGACGGT ACTTTCTTCCTGGTCACACCGGGCATTTTCCAGCGCTATGCTGCCGAGCAACCGGAGCAGTCTGATGGAAGCAACCAGAT CGAGCATTGGCGGCGCGTTCAGCGTCAATTTGAGAAACTGGGCATTCATCGGAAAAGGTCTAATGGGCAAAACATTTGGG CTTGCACTGTGAGAGGTCCTCGCAAAACGAACATTCTGAATGGATACTTACTGAACAGCTCAACAGATATTTTCGCTGCC CTGCCTGCGGATAATTCACATCTCGTACTGGTCAAGTAA Protein sequence : MKRWWFKHEKGNAAEPILAPAPEGFLLPLLAESLLCADHRKKLLQRIWQYTALSEPQFNQLYLDPIHRYASYVQQLPASE SHHHAYPGGMLDHGLELVACSLKLRQSYLLPSGAAPEDQAAQADAWSAAIAYGALLHDIGKIAVDLQVEYENGEVWHPWH GPLTLPYRFRYVAGRDYKLHGAATGLLYTQVLTSRQLDWLSNYPILWGHLLFLLANHYEHAGTLGELVLQADRVSTAQNI GANPTKALQAPKHSLQHHLLTGLRHLAKKEFKFNQPGAAGWLTQDHLWLVSKTATDKLRAYLLAQAVDGIPSSNIALFDE LQSHGLVDVTPEGKAVWSATVSEDDWQHRFTFLRLQPSLIWANEPRPDYFSGTVEPMMDGPLPTSETNESAPDQPPATPE AKQAGAVLQNQEFDYLDDLMDMLQVQGERESGSAVEMAQSATPPPQYSVGQAFIEWLREGVNSHRLVINDSKAKVHTVDG TFFLVTPGIFQRYAAEQPEQSDGSNQIEHWRRVQRQFEKLGIHRKRSNGQNIWACTVRGPRKTNILNGYLLNSSTDIFAA LPADNSHLVLVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG44 | AAN62266.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 8e-139 | 53 |
| ORF C36 | AAN62129.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-132 | 50 |
| pph99 | CAI36140.1 | predicted HD-superfamily hydrolase | Not tested | PPHGI-1 | Protein | 2e-118 | 46 |
