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Name : L483_22300 (L483_22300) Accession : YP_008096226.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : - COG ID : - EC number : - Position : 4652684 - 4654039 bp Length : 1356 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAACACCCTCTCGTTCGGGTTGGTATGTCTTTTCGTGTGCGCCGCTGGCCACGCCGCCGAGAGTGGCTACCACCTGGG CGACCAGGCACAGGTATTGGACGATCGGGTGATGTACACCATCGGTGGCGGATCGGCGGTGGGCGCGCCCTCCTCGCTCT ACCGCCCCAGCGGACTCGGCGTAGGCCTGTCCTGGCGCGCGAACATGATGTGCGGAAACATGAACCTCTCCAACACCCTG CAGAACCAGCTCAATGGTGCCACGCAGGGTTTCCAACAAATCATGGGCAACGTCATCCAGAACGCCACCCAGGCGGTGAT GTCGCTGCCGGCAATGATCATCCAGCGCGCCAATCCCGGGCTGTATGAGCTGCTGAGCAACGGCGTGCTCCAGGGGCGCA TCGACTTCGACCGCTCCAAGCTCACCTGCCAGGCGATGGCGGCGAAGATGGCTGACAAGGTGGATCAGGCCGGTTGGGGA GCACTGGCACAGAACCAGGAAATGCAGCACAACCTGGAGCAGTCCGACGGTGATGCCGTGACCGCGGTGAAGGACACCGA ATCCAACAACGGCAACAACGGTGTCAGCTGGGTCGGCGGGCAAAAGGCCGGCGGCTATGGCCAGGCGCCGATCCGAGTGA CCTCGGACGTGGTCAAGGCGGGTTACAACCTACTGCACAACCGTTCGGTCGAGGACACCTCGGCCGTCGGCTCAAATTGT CAGAACGGCGCAATCTGCCAGGCCTGGGGGAGCCCCGACGAGGCCGCTGAGTGGGCCACACGTGTGCTCGGTGAGACCGA AGTGGAGACCTGTGATGACTGCGAGACGCTGCGCGTCAGCGCGGGTGCAGGTCTCACGCCATTGATCCAGGAAACCTACA CCCAGCACCTTGAAGGCTTGCAGCGCATGTTGTCGGGCGCAGAGGAGCCCACGCCGGAGAACCTGGGCAAAGTCTCCAGC CCGTTGCTGCAGGTCTCCCGTGGGGTCATCGAGGGCCTGCGCGATGATCCCGACCAGAACCTGTTGGCCCGACGCCTGGC CAGCGAGACCGCGCTGTCGAGCGTGATCTACAAGGCGATGCTGCTGCAACGCACGCTGCTCGCCGGCAGCCACGAACCCA ATGTGGCGTCGGCACAACCCGCTACCACTGCCCTCAACAGCAATGTCGAAACACTGGAGCGCGAGATCCGCTTGCTGCAA ACCGAGTTGCAGGTGCGCCAAGCCCTGGCCACCAACACCGCCAGCCTGGTCCTTGATCGCCACGCCGGCGGCGCCGATGC CTCGCGCAGCATCGACCAGCGCGATCCGCAGCCAGACCGCCTACATCATGCGGAGCAAGGAAGGAGCACGCCATGA Protein sequence : MNTLSFGLVCLFVCAAGHAAESGYHLGDQAQVLDDRVMYTIGGGSAVGAPSSLYRPSGLGVGLSWRANMMCGNMNLSNTL QNQLNGATQGFQQIMGNVIQNATQAVMSLPAMIIQRANPGLYELLSNGVLQGRIDFDRSKLTCQAMAAKMADKVDQAGWG ALAQNQEMQHNLEQSDGDAVTAVKDTESNNGNNGVSWVGGQKAGGYGQAPIRVTSDVVKAGYNLLHNRSVEDTSAVGSNC QNGAICQAWGSPDEAAEWATRVLGETEVETCDDCETLRVSAGAGLTPLIQETYTQHLEGLQRMLSGAEEPTPENLGKVSS PLLQVSRGVIEGLRDDPDQNLLARRLASETALSSVIYKAMLLQRTLLAGSHEPNVASAQPATTALNSNVETLEREIRLLQ TELQVRQALATNTASLVLDRHAGGADASRSIDQRDPQPDRLHHAEQGRSTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 4e-95 | 54 |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-94 | 53 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 3e-94 | 53 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-94 | 53 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-92 | 52 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 2e-91 | 49 |
