|
Name : L483_22275 (L483_22275) Accession : YP_008096221.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : conjugal transfer protein Function : - COG functional category : - COG ID : - EC number : - Position : 4647216 - 4647635 bp Length : 420 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAAGCCCACCCGTTTCGGTACTGGACCTGGATTAGCCTGCTGCTTTGCCTGCACCTGGCGGGCTGCACCACCAGCAA GGACGAAATGCTGCCCCACGGCGACCACACCATGCTGGATATTTGGAACAGCGGCGGCGCCGTCGGTACGCAGCAGCAGT TGCAGGAGGCCCGCGATGAGCTGCGCCGGCCAGTGCTTGATCCCGAGCGCCTGATCAAGGACCAGAGCGCCTACACCCGC ACAGCCGCCAACGAGATCCGCGCCCAGTTCCCACGCCTGCCCAACCCTGATCTGGTGATGTACATCTACCCGCACCTGGC CGGTACCCAACAGACGCCCGTGCCCGGCTATTCGACCGTCTTCCCGTTGTACGAGAAGGTCCAGTATGCGCTGCCCGGCG AACGCTTGGACGATCTGTGA Protein sequence : MKAHPFRYWTWISLLLCLHLAGCTTSKDEMLPHGDHTMLDIWNSGGAVGTQQQLQEARDELRRPVLDPERLIKDQSAYTR TAANEIRAQFPRLPNPDLVMYIYPHLAGTQQTPVPGYSTVFPLYEKVQYALPGERLDDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG58 | AAN62280.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 9e-32 | 59 |
| unnamed | ABR13363.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 5e-30 | 56 |
| pph83 | CAI36124.1 | signal recognition particle GTPase | Not tested | PPHGI-1 | Protein | 1e-34 | 56 |
| ORF C48 | AAN62142.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 9e-30 | 56 |
| EXA34 | ABD94643.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-34 | 55 |
| RL023 | AAP84150.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 4e-34 | 54 |
| YpsIP31758_3706 | YP_001402660.1 | lipoprotein | Not tested | YAPI | Protein | 3e-30 | 53 |
| PMI2577 | YP_002152296.1 | lipoprotein | Not tested | Not named | Protein | 3e-29 | 52 |
| api38 | CAF28512.1 | putative lipoprotein | Not tested | YAPI | Protein | 7e-30 | 50 |
| YE3483 | YP_001007642.1 | putative lipoprotein | Not tested | YAPI | Protein | 9e-30 | 50 |
| Pmu_03080 | YP_005176207.1 | conjugative transfer region lipoprotein | Not tested | ICEPmu1 | Protein | 2e-22 | 49 |
| STY4571 | NP_458656.1 | putative lipoprotein | Not tested | SPI-7 | Protein | 1e-29 | 49 |
| t4267 | NP_807866.1 | lipoprotein | Not tested | SPI-7 | Protein | 1e-29 | 49 |
