Gene Information

Name : L483_22250 (L483_22250)
Accession : YP_008096216.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : conjugative transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4643528 - 4643905 bp
Length : 378 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAACTCTCCCGTCACTGCCTCCTTCCGCTGCTCCGGCTGCGAGCTATCTATACAAAAGCCCTGTTCGGCGGCTCGGT
GTTGCTGAGCTCGACGCTGGCCAGGGCTGATCTGCCGACCATGGAAGCCCCCTCCCGCGGCGAGGGCTCAGGCCTGATCG
ACACCATCAAGAACTACGCCTATGACGGCGGCATCCTGCTCGGTCTGTTGATCGCCACCCTCGCCTTCCTGGGCGTGGCT
TGGCATTCGCTCACCGTCTACGCCGACGTGCAAAACCAGCGCAAGACCTGGAAGGACCTCGGCGCCGTGGTCGGCGTCGG
CGCGCTGCTGGTGGTGGTGATCCTGTGGTTCCTCACCAAAGCTGCGACGATCCTGTGA

Protein sequence :
MKLSRHCLLPLLRLRAIYTKALFGGSVLLSSTLARADLPTMEAPSRGEGSGLIDTIKNYAYDGGILLGLLIATLAFLGVA
WHSLTVYADVQNQRKTWKDLGAVVGVGALLVVVILWFLTKAATIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA39 ABD94648.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-09 51
RL028 AAP84155.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-09 51
ORF SG63 AAN62285.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-09 48
api33 CAF28507.1 putative transmembrane protein Not tested YAPI Protein 0.001 46
YpsIP31758_3711 YP_001402665.1 hypothetical protein Not tested YAPI Protein 0.002 46
YE3488 YP_001007647.1 hypothetical protein Not tested YAPI Protein 8e-04 45
ORF C53 AAN62147.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-09 44