Gene Information

Name : L483_22160 (L483_22160)
Accession : YP_008096198.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4623629 - 4624276 bp
Length : 648 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGCTCGGCCTGCTGCTTGCTTCCCTGCTGTTCTCCATCCTGCTGGAGTTCGTAGGCATGCTATGGTTTTGGCCCGACCA
AGGCTGGCATCACAGCCATGCCATGTGGCTCAGTGAACTTGGCTGGCTCAGCAGCCACTTTAGGAGCTCGCTCCTGGTGC
AAGAGCCAGCACAAGCGGCCACGAAAATCCTCGAACGCCTAAACGATTGGGTTGTAGTCCGCTCAGGCTGGGCACAATCC
GACATCCAGCTGAAATTGCTCAGTCGCGAGTCGTCGCTGCAAGGACAACTTGCTCAGGCGTATGTCGCTGGCCAGGATTA
CCTGCTGGCGGCTCTATTCACAGTTTTCACGTTCGTGGTGCGCTTGACTGTGCTCACTCTCGCAACGCCCCTTTTCTTAC
TCGCGGTAGTCACCGGACTGGTTGACGGGTTGATGCGTCGCGACCTCCGCAAGTTCGGGGCGGACAGGGAAAGCAGCTTC
GTCTATCACCGAGCCAAGCGAACATTGCTGCCGTTGATGGTCAGCCCTTGGGTAATCTATCTATCGCTCCCTTGGTCGCT
GAGCCCCAATTGGGTATTACTTCCATGTTCTGCGTTGCTGGGTTTTATGGTGGCCCTCACCGTTAGCACGTTCAAAAAAT
ATCTTTGA

Protein sequence :
MLGLLLASLLFSILLEFVGMLWFWPDQGWHHSHAMWLSELGWLSSHFRSSLLVQEPAQAATKILERLNDWVVVRSGWAQS
DIQLKLLSRESSLQGQLAQAYVAGQDYLLAALFTVFTFVVRLTVLTLATPLFLLAVVTGLVDGLMRRDLRKFGADRESSF
VYHRAKRTLLPLMVSPWVIYLSLPWSLSPNWVLLPCSALLGFMVALTVSTFKKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C64 AAN62158.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-32 52
ORF SG67 AAN62289.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-31 51
pph73 CAI36114.1 hypothetical protein Not tested PPHGI-1 Protein 5e-35 50
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-33 50
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-32 49
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-32 48
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 3e-33 48
PMI2587 YP_002152306.1 hypothetical protein Not tested Not named Protein 2e-18 43
STY4563 NP_458649.1 putative membrane protein Not tested SPI-7 Protein 2e-15 42
t4261 NP_807859.1 hypothetical protein Not tested SPI-7 Protein 2e-15 42
YE3492 YP_001007650.1 putative inner membrane protein Not tested YAPI Protein 2e-19 41