Gene Information

Name : L483_22145 (L483_22145)
Accession : YP_008096195.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4620364 - 4620918 bp
Length : 555 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGCAGCGCGTCGATTGACCCTCGCCCTGACCCTGATGGGAGTGACGGCGGCCCAAGCAGGCGGCCTGCCTCCGCCGGC
CTACCAGTTGGCCGCAGCCCAGGCCGGCATCCCGGCCTCGGTGTTGTTCGCCATTGCCCAGCAAGAGAGCGGCACACCGT
TGCGTGGGCGGCTTCTGCCCTGGCCGTGGACCTTGAATGTGGCCGGTACGCCACAGCGCTTCGCCACCCGTGACCAGGCT
TGCAGCGCACTCAAAGCGGCGCTCACCCGCCATGATCCCAAGCGCATCGATGTCGGCCTGGGCCAGATCAACCTGGGTTA
TCACCCGGAGCGCTATCCCACCGCCTGCGATGCCCTCGATCCGCGCGCCAACCTCGCCGTCACCGCCGATCTGTTGCGCG
CGCACTACGCCGACGTCGGTGACTGGGTCATTGCCGCAGGCCACTATCACCGGCCTGCGGGAGGGCCCCCGGCGGCGCGC
TACCGCACGCAGTTCAGCCTGCACTGGCAGCGCCTTGAAGCCGCCACGTCCAGCCGTGGAGGACCACGCTCATGA

Protein sequence :
MAARRLTLALTLMGVTAAQAGGLPPPAYQLAAAQAGIPASVLFAIAQQESGTPLRGRLLPWPWTLNVAGTPQRFATRDQA
CSALKAALTRHDPKRIDVGLGQINLGYHPERYPTACDALDPRANLAVTADLLRAHYADVGDWVIAAGHYHRPAGGPPAAR
YRTQFSLHWQRLEAATSSRGGPRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 5e-39 62
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 3e-33 56
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 2e-34 54