Gene Information

Name : L483_22140 (L483_22140)
Accession : YP_008096194.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4619666 - 4620382 bp
Length : 717 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGTCCGTTTCATCAGTCTCTCGTTGCTCCTATTCCCCATCTGCCTGGTGTCGGGATCGGGATGGAGTGCCCCAGCCAC
GGTCGAAACGCAGCAGCAGTCCAGCGAGCAGGCCGCGCTGCAGCAAGCGCGATCTGCAGCACAGGCCAAGGCCTGGGGCC
TGACCGACGACGAATGGTCCAAGTTCGAGCGCCTGCAGAGCGGTCCCCGTCAGTACTGGTCACCGCACCTCGATCCGCTG
ACCACCCTGGGCGTGGAAGCCGACTCGGACCAGGAGCGCCAGCGTTACGCCGAGCTGCAGGTGCGACTCGAAGCCAAACG
TGCCGAGCGCGAACTGGCCTATCAAAAAGCCTACTCTGCTGCCTGGGGGCGGTTGTTCCCAGGGCTGCGGCCGGTACAGG
GATTGAGCGATGCAATCCCTCCGTCGAGCAACCCGCGCTATGCGGTGTTTGTGGAAGATCCGTGTTCGACCTGTGAGGCC
AGCCTCCGCCAATGGCTGAGCACGGGCGCCCACTTGGACATCTATCTGGTGGGCAGCCAGGGCGATGATGCGCGCATTCG
CCAATGGGCGCGCAAGGTGGGCATTACCCCTGCCCAGGTTGGCAGCGGCCAGGTCACCCTCAATCATGACCGTGGCCGCT
GGTTCGCCCTCGGCGCCAGCCGCACCTTGCCCGCGCGCTTTCAACAGGTGGAAGGGAAATGGCAGCGCGTCGATTGA

Protein sequence :
MVRFISLSLLLFPICLVSGSGWSAPATVETQQQSSEQAALQQARSAAQAKAWGLTDDEWSKFERLQSGPRQYWSPHLDPL
TTLGVEADSDQERQRYAELQVRLEAKRAERELAYQKAYSAAWGRLFPGLRPVQGLSDAIPPSSNPRYAVFVEDPCSTCEA
SLRQWLSTGAHLDIYLVGSQGDDARIRQWARKVGITPAQVGSGQVTLNHDRGRWFALGASRTLPARFQQVEGKWQRVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG71 AAN62293.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-38 54
ORF C68 AAN62162.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-43 47
pph69 CAI36110.1 hypothetical protein Not tested PPHGI-1 Protein 9e-41 47
YE3495 YP_001007654.1 hypothetical protein Not tested YAPI Protein 1e-33 47
unnamed ABR13379.1 hypothetical protein Not tested PAGI-5 Protein 4e-40 46
RL051 AAP84177.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-39 46
EXA51 ABD94660.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-40 46
STY4558 NP_458644.1 putative exported protein Not tested SPI-7 Protein 3e-31 43
t4256 NP_807854.1 hypothetical protein Not tested SPI-7 Protein 3e-31 43
PMI2592 YP_002152311.1 hypothetical protein Not tested Not named Protein 2e-27 42