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Name : L483_22110 (L483_22110) Accession : YP_008096188.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 4613432 - 4615399 bp Length : 1968 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCGCCTGTTCATCTGCGAGAAACCGTCCCAAGCCCGTGACATCGCCCGAGTACTGCAGGCCAGCTGGCGCGGCGATGG CTACCTGCAGGGCCAGAACGTCACCGTCACCTGGTGCATCGGCCATCTGCTAGAAACCGCGCCCCCTGAGTCCTATGGTG ATTACAAACGCTGGTCGTTGGACGACCTGCCGATCATCCCCGATCACTGGCAGTTGGTGGTCAAGCCCAAGGTCGCCAGC CAACTGAAGGTGATCGACCAACTGCTGCAAAGGTGCGCTGAGGTGGTCATCGCCACCGATGCTGACCGCGAGGGCGAGAT GATCGCCCGGGAGATCCTCGAGCGCTGTCAGTATCAGGGGCCGGTCCTGCGTCTGTGGCTGTCCGCCCTGGATGAAGCCT CGATCCGCCGGGCCTTGGCCGCCTTGCGTCCGGGCGAACAGACCCTGCCGCTGTACCACTGTGCACTGGCCCGCTCCCGT GCCGACTGGCTGGTGGGCATCAACCTAAGCCGGCTGTTCACCCTGCTCGGCCGCCGCGCCGGCTTTGATGGTGTGCTGCC GGTTGGCCGCGTCCAGACCCCGACGTTGCGCCTGGTAGTCGAACGCGACCGGGCCATCGCGAGCTTTGTGCCGCACCCCT TCTGGAACGTCGACGCCCAGTTGGTGGCAGACGGTGTTAGTTTCAAAGCCAGCTGGCAACCTCCGGCTTCGGTCTGCGAC GATGAGGGCCGCTGCCTTGATGAAGCGGCCGCCAGGCAAGCTGCACTGCGCCTGAGCCAACACGGAACGGCCCGTATTGG CACCATCGAGGTGGAACACGTCCGCGAAGGGCCGCCACTGCCGTTTGATCTCGGCACCCTGCAAGAAGTCTGCTCGGCCA AGCTCGGGCTCGGCGCCCAGGAAACGCTGGGGATCGCCCAAGCCCTCTACGAAACCCACAAGGCCACGACCTACCCGCGC ACCGATTGCGGCTACCTGCCCGAGAGCATGCTGGATGAGGTGCCCCGCATACTGCATGCCCTGGTGGCTCCCAGCCCTGC GCTCGGTCAGGTCATCAAAGCGCTGGATCCGTGTCGCCGCTCGCGCGCCTGGAACAGCAGCAAGATCACCGCGCACCACG GGATCATTCCGACCGCCATCAAGCTCGACCTCACTCAGCTGTCTGAGCGCGAGCAGGCAGTTTACGCGCTGATCCGCGCC CGCTACCTCGCTCAGTTCCTTCCTGAGCATGAGTACCTGAAAACCCAGGTGTTGCTGCACAGCCAGGCCGACCAGCTACT GGCCCGGGGCAAGCAGATCCTGGTGCGCGGTTGGAAAGCGGTGATCAACGAAACCCACGGCAATGAGCCCGGCGAGCAGA CTCAACGGCTACCCACACTTCGAGAATCCGTTTCGGTGGCGCTGACTGACGCCGCCGCCATTATCCAACGCACACACCCC CCCAAGGCCTACACCGAGGGCACGCTGGTCAAGGCGATGAAAACCATCGCCAACCAGGTGGCCGATCTGCGGCTCAAGCA GACGCTCAGGGAGAGCTGCGGCCTCGGCACCGAAGCCACCCGCGCGGCCATCATTCAGGGGCTGATCGACCACGGTTATC TGACCAAGAAGAAACGCAGCCTGGCCGCCTCAGCCGCGGCGCACACCCTGATCGAAGCAGTGCCAGCGGAAGTGGCCGAT CCGGTGCTGACGGCGCTATGGGAGCAGGCTTTGGGCCGAATTGAGTCGGGCCAGTTGAGCGTCGAGACCTTTCTAGCCAA GCAGTCGCAGTGGCTGACCCGCTTGGTGCGCAGCAACGCCTCGCTCACCCTGCAGCCGCCCCCATCGAAGGGACCGCTCT GCCCGGTGTGTTGCAGCGGCATGCGCCAGCGCAAAGGCCGTACTGGCAGCTTCTGGTCCTGCATCCGCTACCCGGACTGC AAGGGCACCAAGCCGGTAACTAAAGCCAAGCGCCCGAAGAAGACATGA Protein sequence : MRLFICEKPSQARDIARVLQASWRGDGYLQGQNVTVTWCIGHLLETAPPESYGDYKRWSLDDLPIIPDHWQLVVKPKVAS QLKVIDQLLQRCAEVVIATDADREGEMIAREILERCQYQGPVLRLWLSALDEASIRRALAALRPGEQTLPLYHCALARSR ADWLVGINLSRLFTLLGRRAGFDGVLPVGRVQTPTLRLVVERDRAIASFVPHPFWNVDAQLVADGVSFKASWQPPASVCD DEGRCLDEAAARQAALRLSQHGTARIGTIEVEHVREGPPLPFDLGTLQEVCSAKLGLGAQETLGIAQALYETHKATTYPR TDCGYLPESMLDEVPRILHALVAPSPALGQVIKALDPCRRSRAWNSSKITAHHGIIPTAIKLDLTQLSEREQAVYALIRA RYLAQFLPEHEYLKTQVLLHSQADQLLARGKQILVRGWKAVINETHGNEPGEQTQRLPTLRESVSVALTDAAAIIQRTHP PKAYTEGTLVKAMKTIANQVADLRLKQTLRESCGLGTEATRAAIIQGLIDHGYLTKKKRSLAASAAAHTLIEAVPAEVAD PVLTALWEQALGRIESGQLSVETFLAKQSQWLTRLVRSNASLTLQPPPSKGPLCPVCCSGMRQRKGRTGSFWSCIRYPDC KGTKPVTKAKRPKKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 58 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 58 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 57 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 3e-157 | 50 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-158 | 49 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-158 | 49 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-158 | 49 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-147 | 47 |
