Gene Information

Name : L483_22060 (L483_22060)
Accession : YP_008096178.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : AlpA family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4606251 - 4606466 bp
Length : 216 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCAACAGATCAGCCCTGCCCCGCTGCCTGCCGACCGCCACATCATGCGCCGCGATGAGGTGGAACTGAAAACCGGCTT
CAAACGTTCGCACATCTACAACCTGATGAAAGCCGGTCTATTCCCCCAATGCCGGCGCATTGGTACCCGCGCCGTCGGCT
GGGACTCGCTGGAGATCGAGCAGTGGGTCCATGATCGACTGTCGGTCAGGGAGTAG

Protein sequence :
MQQISPAPLPADRHIMRRDEVELKTGFKRSHIYNLMKAGLFPQCRRIGTRAVGWDSLEIEQWVHDRLSVRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 6e-16 61
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 3e-16 59
unnamed CAA21398.1 - Not tested HPI Protein 5e-09 46
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 4e-09 46
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 6e-06 41