Gene Information

Name : L483_20800 (L483_20800)
Accession : YP_008095935.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : D-alanyl-D-alanine endopeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4377820 - 4378725 bp
Length : 906 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGAAATTCGGCATCTGCGCTACTTTCTAGCGGTGGCAGAGGAACTGCACTTTGCCCGAGCCGCAGAGCGCCTCCACAT
CGAGACATCGCCGCTGTCGCGCGCCATCAAAGAGCTTGAAGAGGAGTTGGGCGTAGCGCTATTTGCGAGAACCACTCGGA
GCACCCGCTTGACTCGTGCAGGCAGACTCTTCTTTGAGAGCGTACCCCGTGTCTTCGCAGCTTTGCAGCAGGCGCGCGAC
AGTGTGAACGCCGCAGCCAATGGCTTTCATTGCCAGCTCCGTATTGCATTGTCTGATGGAATCACGCCATCGCGCCTGCC
TGCGTTGTTGGCGCTCTGCCGGCAGGAAGAGCCGGAAGTGGAAGTTCGCTTCTTCGAAGTGCCTTTGTCACAGCAAATCA
AGGGATTGTGTGGCGAACTGTACGATCTCGGCTTCGCTCAATCGGATGAAGTCGGCGAAGGCATCATCGCCGTGCCGGTG
TGGAGTGACCCTCTGATGGTAGCTGTGCCCGCACGGCACCCCTTGCTATCCCACAAACAGATTCCCCTGGAAGAGCTGTT
GCGGTATCCGCTGGTGCTCTGCGACGCGGTGGCGTGTGAGGGCCATGCTCGGCAAGTTGAACGGGTGCTACGTCGCGTGG
ACATTGAGCCTCTAATTGCCGAACGCGTGACTTCCAGCGATCTAATGATGGTCCTGGTTTCGGCGGGACTTGCACTAGGC
CTCACAGGAGGTGCGCATATTACTGCCAGCAGGGAACAGGGTGTGGTCGCACGGCCGCTGACTGGAGGTTCGCCCATGCT
CACGACCTATCTGCTACGACCGGCCAGCGAGCCGTCAGAAATACTGACTCGCTTCATGGAACGCGTTCATTCGATCAAAT
CTCCAGACGCCAAAAGTCGGCGGTAA

Protein sequence :
MEIRHLRYFLAVAEELHFARAAERLHIETSPLSRAIKELEEELGVALFARTTRSTRLTRAGRLFFESVPRVFAALQQARD
SVNAAANGFHCQLRIALSDGITPSRLPALLALCRQEEPEVEVRFFEVPLSQQIKGLCGELYDLGFAQSDEVGEGIIAVPV
WSDPLMVAVPARHPLLSHKQIPLEELLRYPLVLCDAVACEGHARQVERVLRRVDIEPLIAERVTSSDLMMVLVSAGLALG
LTGGAHITASREQGVVARPLTGGSPMLTTYLLRPASEPSEILTRFMERVHSIKSPDAKSRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 6e-58 52
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 1e-38 41