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Name : gabD (L483_19505) Accession : YP_008095677.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 4142630 - 4144078 bp Length : 1449 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAAACTTGCCGATCGTGATCTGCTGCGTGAAGTTTGCTATATCGATGGAAAATGGCTGGCGGCTGACAGCGGCCAGCG CATTGCCGTGACCAACCCGGCCACCGGCCAAGTGCTGGGCCACGTGCCGCGGATGGGGGCAGAAGAAACCCGCCGTGCCA TCGCGGCTGCCGAGTGCGCCTTGCCAGCGTGGCGGGCGCTGACTGCCAAGGAGCGTGCCGCCCGGCTGCAGGCCTGGTTC CGCGAAATCCTCGCTCATCAGGAAGACCTGGCGCGCATCATGACCGCCGAGCAGGGCAAGCCCCTGGCCGAATCCCGTGG CGAGATTGCCTTTGCCGCCGCTTATGTGGAGTTCTATGCCGAGGAAGGCAAACGCATCTATGGCGATGTGATTCCTTCGC CGAACGCTGATCGGCGCTTGATCGTGACCAAGGAACCGATTGGTGTGTGTGCGGCGATTACACCTTGGAACTTCCCGGCG GCGATGATCACCCGCAAGGCGGCGCCGGCTTTGGCGGCGGGCTGCACGTTGGTGCTCAAGCCCGCTTCGCAAACCCCGTT CAGCGCGCTGGCACTGTGCGTGCTGGCCGAGCGTGCCGGTATCCCGGTGGGTGTGCTTAGCGTGGTGACCGGCGATTCGG CGGCCATTGGCGGCGAGCTGACGGCCAGCCCGGTGGTGCGCAAGTTGTCGTTCACCGGCTCGACCCCCATCGGCATCCAG TTGCTGCGGCAGTCGGCGGCAACGGTGAAGAAGGTGACCATGGAGCTGGGCGGCAACGCTCCGTTCATCGTGTTCGACGA TGCCGACCTGGAAAAAGCGGTGGAAGGCGCGCTGATCGCCAAGTTCCGCAACAGCGGGCAGACCTGCGTGTGCGCCAACC GCTTCTATATCCAGGACGGCATCTACGAGCGCTTCGTGGCGCGCTTTGCCGAGCGCGTGGGTGAGCTGGTCGTCGGGCAG GGCGATGCACCAGGTACACAGGTCGGCCCGATGATCGACGGGCGTGCGGCCAATGGTGTCGAACGGCTGGTCGGCGAAGC TGTGGAGGCCGGTGCGCGGGTGGTGGCGGGAGGGCGTCGGCACGCCATGGGCGAGGCCTTCTTCGAGCCGACCTTGCTGG CGGATGTGACGCCGGACATGCGCGTGGCGCGCGAGGAAATTTTCGGGCCGGTGGCGCCGATCTTCCGCTTCGGCAGTGAG GAGGAAGTGATTGCCCAGGCCAACGACACCGAGTTCGGCCTGGCCTGCTACCTGTATGCCCGGGATGTCGGGCGCATCTG GCGGGTGACGGAAGCGCTGGAGTACGGCATGGTCGGGGTCAACGTCGGCGTGGTGGCGACTGAAGTGGCGCCGTTTGGCG GGGTGAAGGCCTCGGGGTTGGGCAGGGAGGGGTCACGCTACGGGATCGAGGATTACCTGGAACTCAAGTATGTGTGCCTT GGGCTTTAA Protein sequence : MKLADRDLLREVCYIDGKWLAADSGQRIAVTNPATGQVLGHVPRMGAEETRRAIAAAECALPAWRALTAKERAARLQAWF REILAHQEDLARIMTAEQGKPLAESRGEIAFAAAYVEFYAEEGKRIYGDVIPSPNADRRLIVTKEPIGVCAAITPWNFPA AMITRKAAPALAAGCTLVLKPASQTPFSALALCVLAERAGIPVGVLSVVTGDSAAIGGELTASPVVRKLSFTGSTPIGIQ LLRQSAATVKKVTMELGGNAPFIVFDDADLEKAVEGALIAKFRNSGQTCVCANRFYIQDGIYERFVARFAERVGELVVGQ GDAPGTQVGPMIDGRAANGVERLVGEAVEAGARVVAGGRRHAMGEAFFEPTLLADVTPDMRVAREEIFGPVAPIFRFGSE EEVIAQANDTEFGLACYLYARDVGRIWRVTEALEYGMVGVNVGVVATEVAPFGGVKASGLGREGSRYGIEDYLELKYVCL GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 8e-122 | 63 |
