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Name : L483_17005 (L483_17005) Accession : YP_008095179.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : - COG ID : - EC number : - Position : 3581267 - 3582775 bp Length : 1509 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGATCAGCATGGAAATGTTGGGAAAAATCCGGCGGATGTACTTCCGCGACAAGCTCTCGCTGCATCAGATAGCCAAGCG TACCGGACTGTCGAGAAACACCATTCGAAAATGGGTCAGAGCACCCGAAGCCACCCAGCCGGCGTACCAACGGTGCGCAA CCTTCAACAAACTCAGTCCATTTCACGAGACGCTGGAGCAGGCGCTTAAGGCCGATTCGTTTCGGGCAAAGCACAACCGC AGGAGTGCCAAAGCACTCTTCGAACAGATCAAGGCCGAGGGGTACGACGGCGGCTACAGCCAACTCACCGCCTTTATACG CTCGTGGCGCGGCGAGCAAGGCAAGTCTTTACGAGCCTTTGTGCCGCTGACCTTTGCACTCGGGGAGGCCTTTCAATTCG ACTGGAGCGAAGAAGGTCTGCTGATCGGCGGCCTGTTCCGACGCATCCAGGTCTCCCATATGAAGCTGTGCGCCAGTCGC GCATTTTGGTTGGTTGCGTATCCCAGCCAAGGCCACGAGATGTTGTTCGATGCCCATACCCGCTCGTTTGGCGCGTTAGG TGGGGTGCCGCGTCGCGGCATCTACGACAACATGAAGACCGCTGTCGACAAGGTCAACAAGGGTAAGGGCCGCACGGTCA ATGCTCGGTTTGCCGTGATGTGTGCGCACTACCTGTTCGACCCGGACTTCTGCAACGTCGCTTCCGGCTGGGAAAAAGGC ATCGTTGAAAAGAACGTCCAAGACAGCCGACGGCGCATCTGGCTCGATGCTCAAAACTGCATGTTCCACACCTTCGAGGA ATTGAATGCCTGGCTCGGCCAACGCTGCCGTGCGCTCTGGGGCGAACTGCTGCACCCGCAGTACAACGGGCTGACCGTGG CGGACGTCCTGGAGCTGGAACGCGCTGAATTGATGCCGATGCCGACTGCCTTTGATGGCTACGTCGAGCGCACCGTACGG GTCTCCAGCACCTGCCTAATCAGCGTGGCGCGAAATCGCTATTCGGTGCCGTGTGAGCGGGTCGGCCAGTGGGTCAGCAG CCGTTTGTATCCTTCCCGGGTGGTGGTCATCGCCGATGAAACGACGATTGCCAGCCACGAGCGTCTGTTTGATCGAGATC AGGTCAGTTTTGACTGGCAGCATTACATCCCGCTTATCGAGCGCAAGCCTGGAGCGCTGCGCAATGGCGCTCCGTTTGCT GATCTGCCGAAGCCGTTGCAGCTGCTAAAACGCGGTCTGAGGCGTCACGCCAATGGTGATCGAGTCATGACGCAGGTACT GGCGGCTGTTCCCATCGCCGGGCTCGACGCCATATTGGTGGCTGTGGAGTTGGTACTTGAATCAGGCAGCTTGAGTGCTG AGCACATCCTGAATGTCCTGGCTCGACTGACATCGACAGCAGCCCCTCCGTCCGCCGAAACCAGCCTTCAACTCAAGATA GCGCCTGTCGCCAATACGGCACGCTACGACCGGCTCCGTACCACCGATGAGGAGACTCGCAATGCGTGA Protein sequence : MISMEMLGKIRRMYFRDKLSLHQIAKRTGLSRNTIRKWVRAPEATQPAYQRCATFNKLSPFHETLEQALKADSFRAKHNR RSAKALFEQIKAEGYDGGYSQLTAFIRSWRGEQGKSLRAFVPLTFALGEAFQFDWSEEGLLIGGLFRRIQVSHMKLCASR AFWLVAYPSQGHEMLFDAHTRSFGALGGVPRRGIYDNMKTAVDKVNKGKGRTVNARFAVMCAHYLFDPDFCNVASGWEKG IVEKNVQDSRRRIWLDAQNCMFHTFEELNAWLGQRCRALWGELLHPQYNGLTVADVLELERAELMPMPTAFDGYVERTVR VSSTCLISVARNRYSVPCERVGQWVSSRLYPSRVVVIADETTIASHERLFDRDQVSFDWQHYIPLIERKPGALRNGAPFA DLPKPLQLLKRGLRRHANGDRVMTQVLAAVPIAGLDAILVAVELVLESGSLSAEHILNVLARLTSTAAPPSAETSLQLKI APVANTARYDRLRTTDEETRNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 0.0 | 94 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 1e-108 | 47 |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 5e-92 | 42 |
