Gene Information

Name : L483_16850 (L483_16850)
Accession : YP_008095149.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : transposase IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3547140 - 3548021 bp
Length : 882 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGCGGCTGAAGTACGCCTTCATCAAGAAGCACTCGACTGATTACCCGGTGCGGCGCCTTTGCCAAACCCTCAAGGTGCA
CCCCAGCGGCTATTACGCCTGGCTGGCCGAGCCTCAATCTGCCCGAGCAAAAGAAGATCAACGTCTGCTTGGCTTGATCA
AACACGCTTGGCTCGAAAGCGGAGGTGTGTACGGCTATCGCAAAATTCATGGTGACCTGCGTGAGCTGGGAGAGACATGC
GGGCGAAATCGAGTCGGTCGTTTGATGCAAGCAGAGGGGGTTGCGTTCGCAAACGGGTTATCGCCGTCGTCCTGGGTTTT
ATGGCGGAAAACCAACCGTGGCCTCGCCCAACCCCCTTGCCCGGCAGTTCAGGTCAGCGAGCCGAACAAGGTCTGGGTGA
CAGATATCTCTTACATCCGCACCTATGAAGGGTGGCTGTACCTGGCGGTAGTGCTGGATCTGTTCTCTCGCCAAGTCATT
GGTTGGTCAATGAAGCCCAGGATGAGCAGCGACCTAGCCATCGACGCCATGCTGATGGCCTTGTGGCGACGCAAGCCACA
GCAGCAAGTGATGATTCACTCAGACCAAGGCAGTCAGTTCAGTAGCTCAGATTGGCAAAGCTTCCTTAAGGCCAACAATG
TGGTCAGCAGCATGAGCCGACGGGGAAACTGCCACGACAATGCCGTAGCCGAGAGCTTTTTCCAGCTTTTGAAGCGGGAA
CGGGTTCGACGAAAGACCTACGCGACACGTGACGAAGCCCGGAGTGATATTTTCGATTACATCGAGATGTTCTATAACCC
AAAACGTCGACACAGCAGTGCTATGCAGCTGTCTCCAGTAGAGTATGAGAAACGCTATTTCCTGAGCTTGGAGAGTGTCT
AG

Protein sequence :
MRLKYAFIKKHSTDYPVRRLCQTLKVHPSGYYAWLAEPQSARAKEDQRLLGLIKHAWLESGGVYGYRKIHGDLRELGETC
GRNRVGRLMQAEGVAFANGLSPSSWVLWRKTNRGLAQPPCPAVQVSEPNKVWVTDISYIRTYEGWLYLAVVLDLFSRQVI
GWSMKPRMSSDLAIDAMLMALWRRKPQQQVMIHSDQGSQFSSSDWQSFLKANNVVSSMSRRGNCHDNAVAESFFQLLKRE
RVRRKTYATRDEARSDIFDYIEMFYNPKRRHSSAMQLSPVEYEKRYFLSLESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAD44733.1 TnpA Not tested SHI-2 Protein 9e-37 44