Gene Information

Name : L483_16475 (L483_16475)
Accession : YP_008095074.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3471831 - 3472574 bp
Length : 744 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGCCAGACGGGACTCCTGCAATCGTCAAGGGATTGAAACCTATAGAAGACATTGCTGATGAACTGCGCGGGGCCGACTA
TCTGGTATGGCGCAATGGGAGGGGAGCAGTCCGGTTGCTCGGTCGTGAGAACAATCTGATGTTGCTCGAATATGCCGGGG
AGCGAATGCTCTCTCACATCGTTGCCGAGCACGGCGACTACCAGGCGACCGAAATTGCAGCGGAACTAATGGCGAAGCTG
TATGCCGCATCTGAGGAACCCCTGCCTTCTGCCCTTCTCCCGATCCGGGATCGCTTTGCAGCTTTGTTTCAGCGGGCGCG
CGATGATCAAAACGCAGGTTGTCAAACTGACTACGTCCACGCGGCGATTATAGCCGATCAAATGATGAGCAATGCCTCGG
AACTGCGTGGGCTACATGGCGATCTGCATCATGAAAACATCATGTTCTCCAGTCGCGGCTGGCTGGTGATAGATCCCGTC
GGTCTGGTCGGTGAAGTGGGCTTTGGCGCCGCCAATATGTTCTACGATCCGGCTGACAGAGACGACCTTTGTCTCGATCC
TAGACGCATTGCACAGATGGCGGACGCATTCTCTCGTGCGCTGGACGTCGATCCGCGTCGCCTGCTCGACCAGGCGTACG
CTTATGGGTGCCTTTCCGCAGCTTGGAACGCGGATGGAGAAGAGGAGCAACGCGATCTAGCTATCGCGGCCGCGATCAAG
CAGGTGCGACAGACGTCATACTAG

Protein sequence :
MPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIAAELMAKL
YAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNASELRGLHGDLHHENIMFSSRGWLVIDPV
GLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIK
QVRQTSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00281 YP_008207746.1 Streptomycin 6-kinase Not tested AbaR25 Protein 3e-112 99
BJAB0868_00285 YP_008211611.1 Streptomycin 6-kinase Not tested AbaR26 Protein 3e-112 99
strB AEA34676.1 aminoglycoside resistance protein B Not tested Not named Protein 2e-112 99
strB YP_001800933.1 aminoglycoside-6-phosphotransferase Not tested Not named Protein 3e-112 99
strB AFV47971.1 streptomycin (6) phosphotransferase StrB Not tested AbaR25 Protein 3e-112 99
strB AFV47999.1 streptomycin (6) phosphotransferase StrB Not tested delta-AbaR25 Protein 3e-112 99
ABK1_0257 YP_005512829.1 Streptomycin resistance protein B Not tested AbaR4d Protein 5e-112 99
ABZJ_00265 YP_005524221.1 streptomycin 3''-kinase Not tested AbaR22 Protein 5e-112 99
strB ACK44538.1 StrB Not tested SGI1 Protein 3e-112 99
strB YP_005176179.1 aminoglycoside 6-phosphotransferase protein Not tested ICEPmu1 Protein 5e-112 99
strB AGK07030.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 3e-112 99
strB AEQ20908.1 StrB, APH(6)-Id streptomycin(6) phosphtransferase Not tested Tn6166 Protein 5e-112 99
strB AGK07088.1 StrB streptomycin phosphotransferase Not tested SGI1 Protein 3e-112 99
strB AEZ06048.1 StrB, APH(6)-Id, streptomycin(6) phosphotransferase Not tested Tn6167 Protein 5e-112 99
strB AFH57206.1 streptomycin resistance protein Not tested AbaR4a Protein 4e-112 99
strB CAJ77026.1 Streptomycin phosphotransferase B Not tested AbaR1 Protein 2e-110 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_16475 YP_008095074.1 hypothetical protein DQ464881.1.gene5.p01 Protein 2e-112 99
L483_16475 YP_008095074.1 hypothetical protein AF024602.1.gene6.p01 Protein 3e-112 99
L483_16475 YP_008095074.1 hypothetical protein NC_010410.6003392.p0 Protein 1e-110 98
L483_16475 YP_008095074.1 hypothetical protein AJ313522.gene.p01 Protein 6e-96 89