Gene Information

Name : L483_15665 (L483_15665)
Accession : YP_008094913.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3327110 - 3328507 bp
Length : 1398 bp
Strand : +
Note : unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACGAAGACTACGCTTCAGAGCAGCTCGACCTACAGACTTCCTCGCTGAAGGTGCCACCGCACTCTATCGAGGCAGA
GCAATCCGTGCTCGGTGGTCTCATGCTCGATAACAATGCCTGGGAGCGCGTGCTCGATCAGGTCTCCGACGGCGATTTCT
ACCGGCACGATCACCGGCTTATTTTCCGCGCCATTCACAAGCTGGCGGACCTGAACGAGCCATTCGATATCGTCACGCTG
CATGAGCGCCTGGACAAGGAAGGGCTGAGCAGCCAGGTTGGCGGGCTGGCATATCTGGCAGAGCTGGCCAAGAACACCCC
TTCGGTGGCCAACATCAAAGCCTATGCTGCGATCATCAGGGAGCGGGCGACCCTGCGCCAGCTGATCAGCATCAGCACGG
ACATCGCAGACAGTGCCTTCAACCCTGAAGGCCGGAACGCTTCGGAGATCCTCGACGAGGCCGAACGGCAGATTTTCCAG
ATTGCTGAAGCCCGGCCCAAAACCGGCGGGCCGGTGGGTGTCAAAGATCTCCTGACGATGGCCATCGATCGCATCGACAC
GTTATTCAACTCTGACAGCGACATCACTGGCGTTTCGACCGGCTTCACCGACCTGGACGAGAAGACCAGCGGCCTGCAGG
CGGCCGACCTCATCATTGTGGCCGGCCGGCCGTCGATGGGTAAGACGACCTTCGCCATGAACCTGGTGGAAAACGCTGTG
CTGCGGTCCGAGAAAGCGGTGCTCGTGTTCTCGCTCGAAATGCCAGGTGAGTCGCTGATCATGCGTATGCTGTCATCGCT
CGGCCGCATCGACCAAACCAAGGTGCGTTCCGGCCAGCTGGATGACGATGACTGGCCGCGATTGACCTCGGCGGTGAATC
TGCTCAACAACCGCAAACTGTTCATCGACGACACCGCCGGTATCAGTCCCTCGGAGATGCGTGCACGGACCCGGCGGCTC
GCCCGCGAGCACGGCGAGATTGGCATGATCATGGTTGACTACCTGCAGTTGATGCAGATCCCGGGCTCCGCCGGCGACAA
CCGGACCAATGAGATTTCCGAGATCTCTCGTTCCCTCAAGGCCCTGGCCAAGGAGTTCAACTGCCCGGTAATCGCCCTGT
CGCAGCTGAACCGTTCCCTGGAGCAGCGGCCGAACAAGCGCCCGGTGAACTCCGACTTGCGTGAATCCGGTGCGATCGAG
CAGGACGCCGACGTGATCATGTTCGTGTACCGCGACGAGGTGTACCACCCCGAGACCGAGCACAAGGGTGTGGCTGAAAT
CATCATCGGCAAGCAGCGTAACGGCCCCATCGGTTTTGTGCGCCTGGCGTTCATCGGCAAGTACACCCGCTTCGAGAACC
TCGCGCCGGGCATGTACAACTTCGACGATGATGAGTAG

Protein sequence :
MNEDYASEQLDLQTSSLKVPPHSIEAEQSVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIHKLADLNEPFDIVTL
HERLDKEGLSSQVGGLAYLAELAKNTPSVANIKAYAAIIRERATLRQLISISTDIADSAFNPEGRNASEILDEAERQIFQ
IAEARPKTGGPVGVKDLLTMAIDRIDTLFNSDSDITGVSTGFTDLDEKTSGLQAADLIIVAGRPSMGKTTFAMNLVENAV
LRSEKAVLVFSLEMPGESLIMRMLSSLGRIDQTKVRSGQLDDDDWPRLTSAVNLLNNRKLFIDDTAGISPSEMRARTRRL
AREHGEIGMIMVDYLQLMQIPGSAGDNRTNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE
QDADVIMFVYRDEVYHPETEHKGVAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGMYNFDDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-118 58
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 5e-105 55
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-103 52
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-102 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-102 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 9e-99 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 6e-96 47
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 6e-96 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-77 43