Gene Information

Name : L483_15210 (L483_15210)
Accession : YP_008094825.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3241683 - 3242114 bp
Length : 432 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAAAAACTATCCCTCCTTTTGCTTCTGGCAGGTGTGCTGACCGAGATGTCCTCGGCTGCTCACGCGGACTGCTTCGC
CGACGCTGCTGCCCGCTATAGGGTCAGCGAGAAGCTGCTCCGCGCCATCCAGGTCACCGAAAATCGCCCGGGTAAAGCTG
ACGCAGTGAGCCCTAAGAACAGCGATGGCAGCTGGGACATTGGGCTGATGCAGATCAACTCATCTTGGCTCCCTGCGCTG
TCGAAATACGGCATCGGTGAGAAAGAGCTTTTAGATCGCTGTGTCAGTGCAAATGTTGGGGCGTGGATCCTAGCAAGCAA
CATCGCCTCTCACGGCCACGTCTGGAAAGCTGTTGGCGCATACAACAGTCCCAACGAGAAAAGTCAGCGAATATATATTC
AGAAAGTCATGAGCAACTATGGTGGTCTATAA

Protein sequence :
MKKLSLLLLLAGVLTEMSSAAHADCFADAAARYRVSEKLLRAIQVTENRPGKADAVSPKNSDGSWDIGLMQINSSWLPAL
SKYGIGEKELLDRCVSANVGAWILASNIASHGHVWKAVGAYNSPNEKSQRIYIQKVMSNYGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC31524.1 L0045 Not tested LEE Protein 2e-13 44
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 3e-13 44
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 2e-13 44
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 3e-13 44
unnamed AAL06358.1 unknown Not tested LEE Protein 8e-14 44
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-13 43
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 4e-13 42
unnamed AAK26704.1 unknown Not tested LEE Protein 3e-13 42
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 4e-13 42
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-13 42
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-13 42
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-13 42
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 6e-13 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_15210 YP_008094825.1 hypothetical protein VFG0823 Protein 9e-14 44
L483_15210 YP_008094825.1 hypothetical protein VFG0719 Protein 3e-13 42