Gene Information

Name : L483_14950 (L483_14950)
Accession : YP_008094773.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3192063 - 3192482 bp
Length : 420 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGAAAACACTGTGGAAAGCCTGACCATCGGCGCCTTCGCCAAGGCGGCCGGGGTCAACGTGGAAACCATCCGGTTCTA
TCAACGCAAGGGGCTGTTGCCCGAACCGGACAAGCCCTACGGCAGCATTCGCCGCTACGGCGAGGCGGACGTGGCCCGGG
TGAAATTCGTCAAATCCGCGCAACGACTGGGCTTCAGCCTCGATGAGGTGGCCGGGCTGTTGCGATTGGATGACGGCGCT
CACTGCGACGAAGCGCGCGTGCTCGCCGAGCAGAAGCTCGAGGATGTGCGGGGGAAACTCGCGGATCTGCGGCGGATCGA
GTCGGTGTTGGCGCGGCTGGTTCACGATTGTTGTGCGAGCCACGGGACGGTTTCCTGTCCGCTGATCGTTTCGCTGCAGG
GGGAAAAGGAACTGCGCTGA

Protein sequence :
MENTVESLTIGAFAKAAGVNVETIRFYQRKGLLPEPDKPYGSIRRYGEADVARVKFVKSAQRLGFSLDEVAGLLRLDDGA
HCDEARVLAEQKLEDVRGKLADLRRIESVLARLVHDCCASHGTVSCPLIVSLQGEKELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 9e-56 93
merR ACK44535.1 MerR Not tested SGI1 Protein 6e-48 79
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 6e-48 79
merR AFG30124.1 MerR Not tested PAGI-2 Protein 6e-48 79
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 8e-48 79
merR AGK07025.1 MerR Not tested SGI1 Protein 3e-47 78
merR AGK07083.1 MerR Not tested SGI1 Protein 3e-47 78
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 6e-47 75
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 9e-47 75
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 5e-44 71
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 1e-26 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_14950 YP_008094773.1 MerR family transcriptional regulator BAC0686 Protein 9e-51 78
L483_14950 YP_008094773.1 MerR family transcriptional regulator BAC0683 Protein 1e-49 78
L483_14950 YP_008094773.1 MerR family transcriptional regulator BAC0688 Protein 5e-49 77
L483_14950 YP_008094773.1 MerR family transcriptional regulator BAC0232 Protein 1e-47 77
L483_14950 YP_008094773.1 MerR family transcriptional regulator BAC0687 Protein 1e-47 77
L483_14950 YP_008094773.1 MerR family transcriptional regulator BAC0684 Protein 3e-49 77
L483_14950 YP_008094773.1 MerR family transcriptional regulator BAC0689 Protein 3e-46 74