|
Name : L483_13640 (L483_13640) Accession : YP_008094512.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : microcin C ABC transporter ATP-binding protein YejF Function : - COG functional category : - COG ID : - EC number : - Position : 2905553 - 2907175 bp Length : 1623 bp Strand : - Note : with YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAACAACCAGCCTTTGCTTGTGGTACGCGACCTCAGCATCCGTTATCACGCCTCTGGCCAGACCACGCAAGCCGTCAA GCACCTTACCTTCAGCCTGGGCCAGGGCGAAACGGTGGCCATTGTCGGCGAGTCAGGTTCGGGTAAGTCGACCTTGGCAA ACGCCCTGCTCGGCCTGCTACCAGGCACGGCGCGCATCGACAGCGGCCAGCTGTGGGTTGACGGGCTGGATGTGGTGCGC GCCAGCGAGCGGCAGAAGCGCCAGCTGCGTGGGCGTACGGTGGGCCTGGTACCGCAAGACCCGATGGTCAGCCTGAACCC CACCCTGCGCATCGGGCAGCAGATTGGTGAGGCACTGGTGCTGGCCCAAGGCGTCCGCTCGCGCAGCGTGGATGCCGATG TGCTGGCACTCCTCGCCCAGGTTGGCCTGGACAACCCGGCCCTGCGCGCCCGCCAGTACCCGCACGAGCTGTCTGGCGGC ATGCGCCAGCGGGTGCTGATTGCCATCGCCCTGGCCGGCAACCCACGCCTGATCATCGCCGATGAACCCACCAGCGCGCT GGACGTGACCGTGCAACGCAAGATCCTCGATCATTTGCAGCGGCTGGTGGCCGAGCGTGGCATCTCATTGCTGATCATCA CCCACGACCTGGGCATGGCCACCGACCGCGCAAACCGCCTGCTGGTGATGAAACAGGGCGAGCTGGTGGAACACGGCTCA CCTGCGCAGATCCTGAAGGCACCGCAGCACCCGTACACCCGCGCCCTGCTCAATGCCGCGCCGGCATTCAGTGCCCGTCG CCAGCCCCGGCAACCGCCGCCGGGCGCAAAGCCGATCCTTAGCCTGCAGGGGGTTGGCAAAACGTTCGCGTTGCCCAAGG TAAAAGGCCAGAACAACGGCTTTGTCGCGTTGCAGGGCCTGGACTTGCAGGTTCACCCGGGGCAAACGCTGGCCATCGTC GGTGAATCCGGTTCGGGCAAGAGCACCACCCTGCGCATCGCCCTTGGCCTGGAGGCGCCCAGCCAGGGCCGTGTGCTGTT CGACCAACAGGACGTCACCGGCCACGGCTGGCGCCAGTTCCGCCCCTTGCGCCGACGCATGCAGTTGGTCCAGCAAAACC CCTTCGCCGCCCTCGACCCGCGTTTCACGGTGTTCGACAGCATCGTCGAGCCGCTGGTGGCGTTTGGCCTGCTCAAAGGT GCGGCACTGGAGCAGCGCGCACGCGAACTGATCGAACGCGTGCACCTGCCTCTGCATTACCTTGACCGCCTGCCCCGCGA ACTGTCCGGCGGCCAGCGGCAGCGGGTGGCCATCGCCCGGGCGCTGGCACTACAGCCAGAACTGTTGCTGCTCGACGAGC CAGTAAGTGCGCTGGATGTATCGGTACAGGCACAGATTCTGGCACTGCTGGATGAGCTGCAACGGGAGCTGGGCATGGCT TATGTGCTGGTATCGCATGACCTGGCGGTGGTAGCGAGCATGGCTGACCAAGTGCTGGTGCTGCGCCAGGGGCAGGTGGT GGAGCGCGGGACGGTGGCGCAGGTGTTCGACAGGCCGACGAGTGATTACACGCGAGAGTTGATTGCTGCCGTGCCTGGGC GGTTGGTCACTGTTGCAGCTTGA Protein sequence : MNNQPLLVVRDLSIRYHASGQTTQAVKHLTFSLGQGETVAIVGESGSGKSTLANALLGLLPGTARIDSGQLWVDGLDVVR ASERQKRQLRGRTVGLVPQDPMVSLNPTLRIGQQIGEALVLAQGVRSRSVDADVLALLAQVGLDNPALRARQYPHELSGG MRQRVLIAIALAGNPRLIIADEPTSALDVTVQRKILDHLQRLVAERGISLLIITHDLGMATDRANRLLVMKQGELVEHGS PAQILKAPQHPYTRALLNAAPAFSARRQPRQPPPGAKPILSLQGVGKTFALPKVKGQNNGFVALQGLDLQVHPGQTLAIV GESGSGKSTTLRIALGLEAPSQGRVLFDQQDVTGHGWRQFRPLRRRMQLVQQNPFAALDPRFTVFDSIVEPLVAFGLLKG AALEQRARELIERVHLPLHYLDRLPRELSGGQRQRVAIARALALQPELLLLDEPVSALDVSVQAQILALLDELQRELGMA YVLVSHDLAVVASMADQVLVLRQGQVVERGTVAQVFDRPTSDYTRELIAAVPGRLVTVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-110 | 48 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-73 | 41 |
