Gene Information

Name : L483_01355 (L483_01355)
Accession : YP_008092126.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 288676 - 289524 bp
Length : 849 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGCCGCAAGCAACGCCCCCGCCAAGAACTACCGCTCCGACTGGTTCCGCATCTTCGTCGAGGGCGCAACCACTGACGG
CCGCACCATCGAACGCTCCTGGATCGAGCAGATGGCCGCGACCTATGACCCGAAAACATACGGTGCCCGCCTCAATTGCG
AGCACATCCGCGGCCTGGGCCCGGACAGCCTGTTCGGTTCGTTTGGCGATGTGCTGGCCCTGAAGGCCGAAGAGGTTGAG
ATCGGTGGCGAGAAGAAGCTCGCCCTGTACGGGAAGATCGAGCCAACCGCGAGCCTGATCGAGCTGAACAAAAAGGGCCA
AAAGATCTACACCTCGGCAGAGGTTCAGCTCAACTTTGCCGAGTCGGGCAAGGCCTATCTGGTCGGCCTGGCGGTCACTG
ACAGCCCGGCCAGCCTGGGCACTGAAGCCCTCAAGTTCAGCTCGCAGAGCGGCTTGGCCGCTCGAAAGCAGCACCAGGAC
AACCTTTTCAGCGCCGCTGAAGAGGTCTCCCTCAAATTCGAGGAAGTCGTCGAAACCCCATCCATGTTCGCGGCATTGCG
CGACAAGGTCGGCGAACTACTCGGCAAGAGCAAGGACAAGGAAGGCAAGGATGCCGCCAGCTTTACCGCCCTGGGCGAGC
TGATCGAACAGATCGCAACCCATGGCGCCGAGCAGGCCGAAGCCTTCACCGCGGAGAAGAACGCCCGCGAGAAGCTCCAG
GCCGACCACGACAAGCTTTCCAAGGACTTCAACGAGCTGGTCAAGCGCCTGGGCGAAACCGAAGACCACTCCCAGACGCA
ACGCCCACCAGTGACCGGTGGCGACGGGCAGATCCAGGCCGAGTACTGA

Protein sequence :
MAASNAPAKNYRSDWFRIFVEGATTDGRTIERSWIEQMAATYDPKTYGARLNCEHIRGLGPDSLFGSFGDVLALKAEEVE
IGGEKKLALYGKIEPTASLIELNKKGQKIYTSAEVQLNFAESGKAYLVGLAVTDSPASLGTEALKFSSQSGLAARKQHQD
NLFSAAEEVSLKFEEVVETPSMFAALRDKVGELLGKSKDKEGKDAASFTALGELIEQIATHGAEQAEAFTAEKNAREKLQ
ADHDKLSKDFNELVKRLGETEDHSQTQRPPVTGGDGQIQAEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 1e-70 58
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 5e-43 45
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 5e-43 45