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Name : L483_12800 (L483_12800) Accession : YP_008094345.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : type VI secretion protein VgrG Function : - COG functional category : - COG ID : - EC number : - Position : 2748335 - 2750413 bp Length : 2079 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGTCTAGCCAATCCGATTTGCGCTTCACCTTCCAGCCGCTGGTGGGCCGTAGCGAGTTCGAAGTGGTGTCGTTCGAGCT GGATGAAGCCATCAGCACACCATTCCAGTTGCAGCTGGAACTGATCAGTTTCGAAGACGCTGTCGACTTTGGCCAACTGC TCGACAAACCGGTGTTGTTCACCCTTTGGCGCGGTGAGCGCCCGCTGCGCTATGTGCACGGCCTGGTCAGCACGTTTAGC CAAGGTGAAACGGGCTTCCATCGCACCCGCTACCACGCCTTGGTCGAGCCCGTGCTGGCCCGTGCGGGGTTGCGCTCGAA CTGGCGCATCTTCCAGCAGAAAACCGTATCGCAAATCCTCGAAATCATGCTCAAGCGCCAGGGCGTGAATGCGTACCAGC TCAAGTGCATCGATCAGCACCAGGTGCGCGAATTCTGCGTGCAGGCCGGTGAAACCGACCTCGATTTCATTGCTCGCCTG GCCGCCGAAGAGGGCCTCGTCTACCGCTTCGAGCACACGCCGAAAGGCCACACGCTGATCATCACCGACCGGCTGCTGGC GCTGGGGCAGATCAGTCAGGGCGTCATCAAGGCCGACGACGAGGATGAAGGCTTTTTCGAGCCGGACGACACCGACCCCA ACCAGGTGCTGTACCACGCCAACAGCGGCGGCGATCAGGCCAGGCCGTGCCTGCGCCGCCTGCGTTACAGCGAGCAGGTA CGTACCGCGCGCCAGGTGCAGCGCGACTACACCTTCACCCACCCGGCCTACCGCCAGGAGCAGCGTGCCGAGGGCAGCGA CCTCAGGCACCAGTCCACCACGTACGAGCGCTTCGACTACCCCGGTCGCTACAAGCGCGAGGCCGTCGGCGCCCCCTTCA CCGCCACCCGCATCACAGCCTGGCGCCATGACGCCCACCTGGCCGAGGTGGAAGGCGACGATGTGCGCCTGCAACCGGGG CTGAGCTTCACCCTGATCGGGCACCCGCGCGAAGACCTGAACAGGCATTGGCGGGTAAGCCGCGTGCACCACGAAGGCAC CCAGTTCACCAGCCTTCAGGAGGAAGCTGCAGGTGCCCGGCAAGGTACCCGCTACTGCCAGGAGGCTGTGCTGGTGCCCG GCAGAACCGAATGGCGCCCGGCGCCGTTGCCCAAGCCGCGCATCGACGGCCCGCAGATGGCAACGGTGGTGGGGCCCAGG GGCGAGGAGATCTACTGCGACCCATGGGGCCGGGTGAAAGTCAGCTTCCCCTGGGACCGGGAAAGCCAGGACAACGAGTT CAGTTCCTGCTGGGTACGCGTGTCGCAAGGCTGGGCCGGCGGCAGCTGGGGTTCGATGGCCATTCCGCGCATTGGCCAGG ACGTGATCATCCAGTACGTCGACGCCGACCCGGACCAGCCGATGATCACCGGGCGCACCTACTGTGGCAATCAGCTGCCG CCGTATGACCTGCCCAAGCACAAGACGCGGATGACCATCAAGAGCCAGACCCATAAGGGCGATGGTTTTAACGAGCTGCG TTTCGAGGATGAACTGGGCAAAGAAGAAGTGTTCATCCATGCCCAAAGGAACCAGGTCAATGTGGTGGGCAATGACGAAA CCACGACTATTGGGCGCAATCGCGTGGAGCAGGTCGGTAATGATGAGCAACTGAGCATCGGCAGCAACTTCCGCCAGGAC ACGGCCCGTGACCATACCCAGGTCATTGGGCAAAACAGCCGTGTGGACATCAAGCATGACCTGAACGAACAAGTGGGCAA CAACCGCAGCCAGACAACGGGGGCCAACCAGCGGGTTGTCATCGGCAACAACAGCGAGCTTGTGATCAAAGGGGCTCAAT CGATCAGCGTCGGGCAGGGGGTGCAACAACGCACGACGGTCTATCAGTTGCTGGCCAGTGAACGCATCGAGTTCAGAAGC CCTGGCGCCAGCATCGTGCTGGATGCCCAGGGCATTACCATCAGCGGCTTGACACTCGACCTACAGGGGCAGACCAAGGC GACTGGCGAAGGGAACGCCAGTAGCGAGCCACTTGAGCTTACGCCTGACGCCAGCAACCAGTGCGAGGCCAAGTCGTGA Protein sequence : MSSQSDLRFTFQPLVGRSEFEVVSFELDEAISTPFQLQLELISFEDAVDFGQLLDKPVLFTLWRGERPLRYVHGLVSTFS QGETGFHRTRYHALVEPVLARAGLRSNWRIFQQKTVSQILEIMLKRQGVNAYQLKCIDQHQVREFCVQAGETDLDFIARL AAEEGLVYRFEHTPKGHTLIITDRLLALGQISQGVIKADDEDEGFFEPDDTDPNQVLYHANSGGDQARPCLRRLRYSEQV RTARQVQRDYTFTHPAYRQEQRAEGSDLRHQSTTYERFDYPGRYKREAVGAPFTATRITAWRHDAHLAEVEGDDVRLQPG LSFTLIGHPREDLNRHWRVSRVHHEGTQFTSLQEEAAGARQGTRYCQEAVLVPGRTEWRPAPLPKPRIDGPQMATVVGPR GEEIYCDPWGRVKVSFPWDRESQDNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVDADPDQPMITGRTYCGNQLP PYDLPKHKTRMTIKSQTHKGDGFNELRFEDELGKEEVFIHAQRNQVNVVGNDETTTIGRNRVEQVGNDEQLSIGSNFRQD TARDHTQVIGQNSRVDIKHDLNEQVGNNRSQTTGANQRVVIGNNSELVIKGAQSISVGQGVQQRTTVYQLLASERIEFRS PGASIVLDAQGITISGLTLDLQGQTKATGEGNASSEPLELTPDASNQCEAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 8e-112 | 41 |
