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Name : L483_12475 (L483_12475) Accession : YP_008094280.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuC Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 2680110 - 2681270 bp Length : 1161 bp Strand : + Note : binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGATTGCGCGCTCATACGATGCCAAGCCATTTGTGAAGATGGGGCAGCCTTACTTCCAGATCAAAGACCATTTACGCCG TAACGGTGTGGCCGCATTCAGCAGCAATTACGCGTTGTACGGCAATATCAGCGAGCGCGTGATGACGATCATCGAGTCGA TGGTGCCGGCACTTGAGGTCTACTCGATCGATGAGGCCTTTGCTGATCTAACAGGACTTCCCGGCGACCTGACCGCTTTT GGCCGAAAGATACGAGCGACCATTTTCAAGCACACGGGAATTCCAGTTGGCATCGGCATCGCGCGTACCAAGACCCTGGC CAAGCTGGCGAATCACACGGCGAAACGCCTGTTGGAGAAGACCGGCGGAGTCGTTGATCTCTGCGATCAAACCAAACGTG AATGGACGTTGCGCAACACTGACGTTGGTGAGGTCTGGGGAGTGGGCAAACGGATGAAGGGGCATCTGGAATGCCTGGGC ATCCAGACGGCAATGGATCTCGCAAACGCAAACGCAGACGCCTGGACGCCCAGGCAGAAATTCAGCGTCGTGATCGAGAA GACTGCGCGCGAGCTTGCCGGCACCCCTTGCCTGGAACTAGAGGAGGCTGAGCCGCCAAAGCAAGAGATCTGCTGCAGTC GCATGTTCGGGAATCGGCTGACCGAAATGGAACCGATCAAAGAAGCCGTGGCCACTTACACGCAACGCGCTGCTGAAAAA TTGAGGGCACAGAATTCGCTGTGCAAAAAAATTCGTGTGAGCATCCGGACAGGGATGTTCAACCCCGAAGAAGCGAAGTA CGCGAGCGGCGCGCTGGTCGAGTTGCCATATCCCACGAACGATGTTCGGCTCATGACCAAGGCCTCTACCGAGGCTGTCA CCCGTCTCTTCCGACCGGGGTTCAAATATAGCAAGGCGGAGGTCTTGCTCATGGATCTGAGGCAGCCGGGGGAGTTCACA GACGACCTTTTTGCTCATTCGCAGCCGGCTATGGCCGATACATTGATGAGTGTCTTGGACGATATCAACAACAAGTGGGG ACGAGGGACGCTCAGGGTGGCCAGCGTTCCCAAAGATCCAGGTTGGGCCATGCGCCGCGATTTGATGAGCCAAAGCTACA CGACGCGGCTAGATCAGCTTTGGACTGTCAAAGCTATTTAG Protein sequence : MIARSYDAKPFVKMGQPYFQIKDHLRRNGVAAFSSNYALYGNISERVMTIIESMVPALEVYSIDEAFADLTGLPGDLTAF GRKIRATIFKHTGIPVGIGIARTKTLAKLANHTAKRLLEKTGGVVDLCDQTKREWTLRNTDVGEVWGVGKRMKGHLECLG IQTAMDLANANADAWTPRQKFSVVIEKTARELAGTPCLELEEAEPPKQEICCSRMFGNRLTEMEPIKEAVATYTQRAAEK LRAQNSLCKKIRVSIRTGMFNPEEAKYASGALVELPYPTNDVRLMTKASTEAVTRLFRPGFKYSKAEVLLMDLRQPGEFT DDLFAHSQPAMADTLMSVLDDINNKWGRGTLRVASVPKDPGWAMRRDLMSQSYTTRLDQLWTVKAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-152 | 80 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 2e-116 | 65 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 2e-63 | 42 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 2e-63 | 42 |
