Gene Information

Name : L483_12005 (L483_12005)
Accession : YP_008094187.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : AlpA family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2580209 - 2580424 bp
Length : 216 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCAACCGAACAGCCCTAACCCTCTGGCAGCCGACCGCCACATCATGCGCCGCGATGAAGTGGAGCAGAAAACCGGCTT
CAAACGCTCGCACATCTACAACCTGATGAAGGCTGGCCATTTCCCGCAATGCCGGCGCATCGGCACCCGCGCTGTCGGTT
GGGATTCTCTGGAAATCGAACAGTGGGTTCAGGACCGACTGTCCACGGGGGACTGA

Protein sequence :
MQPNSPNPLAADRHIMRRDEVEQKTGFKRSHIYNLMKAGHFPQCRRIGTRAVGWDSLEIEQWVQDRLSTGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 1e-16 58
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 9e-17 57
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 6e-10 48
unnamed CAA21398.1 - Not tested HPI Protein 9e-10 48
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 4e-06 42