Gene Information

Name : L483_11970 (L483_11970)
Accession : YP_008094180.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2574203 - 2574631 bp
Length : 429 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGTACTTTGTTTGTTGGTGAAGGCAACATCGGCAGCGTGCCGGAGTATCAGGAGTTCAACACCAACCCGGATGAGCC
GCGGCGCCTGCTGCGACTGAATGTCTACTTCGACAACCCGGTTCCGCGGGAAGGCGGCTACGAGGACCGCGGCGGCTATT
GGGCGCCCGTCGAGCTCTGGAACCGGGACGCCGAGCACTGGGCCACGCTCTACCAAAAAGGCATGCGCGTTCTGGTCGAG
GGACGCACGGTCAAGGAGGAATGGGAGGACAGCGAGGACAACGCGCGCGTGACGTTCAAGGTGGAGGCGCGGCGCATCGG
TATTCTGCCGCACCGCCTGGCCTCGGTGACCATGCGCGAGAAAGCCAGCGATAACGCCAGTGGTTCGCGCAAGGGGGGTG
GCAAGAAAGCACCACGCAAGCCCGGGTAA

Protein sequence :
MSTLFVGEGNIGSVPEYQEFNTNPDEPRRLLRLNVYFDNPVPREGGYEDRGGYWAPVELWNRDAEHWATLYQKGMRVLVE
GRTVKEEWEDSEDNARVTFKVEARRIGILPHRLASVTMREKASDNASGSRKGGGKKAPRKPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 9e-45 72
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 3e-37 63
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 1e-25 56
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 6e-30 54