|
Name : L483_11910 (L483_11910) Accession : YP_008094168.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : conjugal transfer protein TraG Function : - COG functional category : - COG ID : - EC number : - Position : 2563275 - 2565398 bp Length : 2124 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGGCGAGCATGCGATGGAGTCCCTGCTCCGCCCTGCGGTGGAACTGTACACCGTGGGTATCTGCGCCGGTGCCGGCGC GCTGTGCCTGCACTCGCCCTGGGCGGTGGCGCTGTCGCCCGAGGTGGGGGCCGGCATGGCACTGGCCTATACCGCGTTCG GCCTGAAGCGGCTCAACGAGGCGCGGATCGTCTTACGCTATCGGCGCAACATCCGCCGCCTGCCACGCTACTCGCTGACC AGTCGGCAGATTCCGGTCAGCGGCAAGCGCCTGTTCATGGGCCGTGGCTTTCGCTGGACCCGCCTGCACACCCAGCGCCT GCTCGAGGCGCAGGACCCGGCGCTGGCCCGCTATGTCAACCAATCGGCCGCTCACCAGTGGGCGCGACGAATGGAACAAT TGCTGGAGAAGGCCCCATCTGGGCTGTCAATGCTGCCCCGATTGACCGCCTGGGACAGCCCATTCAACCCGGTGCGGCCA CTGCCGCCGGTGGGCGGCTCGCCATTGCTCCACGGCGTCGAGCCAAAGGAACAGGAAGCCAGCTTGCCGCTGGGCGAGCG CGTAGGCCACACCCTGGTACTGGGGACCACCCGAGTCGGCAAGACGCGCCTGGCCGAGGTGTACATCACCCAAGACATCC ACCGCCCTAGCCAGGAAGTGCTCATCGTCTTCGACCCCAAGGGCGATGCCGACCTGCTCAAGCGCATGTACGTGGAAGCC CGCCGCGCCGGCCGCGAGCATGAGTTCTATGTGTTCCACCTAGGCTGGCCGGAGATCTCCGCCCGCTACAATGCCATCGG CCGCTTCGGCCGCATTTCCGAAGTCGCCACCCGCATCGCCGGCCAGCTGAGCGGCGAAGGCAACTCGGCAGCGTTTCGCG AGTTCGCCTGGCGCTTCGTCAACATCATAGCCCGGGCGCTGATCGAGCTCGGCCGGCGCCCGGACTACCTGCAGATCCAG AGACACGTGGTGAACATCGATGCGCTGTTCATCGAGTACGCCCAGCACTTCTTCGCCCGCCATGATCCCCAGGCCTGGGA AGCGATCGTGCAGATCGAGGGCCGCCTGAACGAAAAAAACATCCCGCGACACATGATCGGCCGGGAAAAGCGCGTGGTCG CCATCGAGCAGTACCTGACCGCCAAGCGCATTTTCGATCCGGTGATGGACGGGCTCCGTTCGGCCGTGCGCTACGACCGC ACCTACTTCGACAAGATCGTAGCCTCGCTGTTGCCGCTGCTGGAAAAGCTCACCAGCGGCAAGACCGCACAACTACTCGC CCCCAACTACACCGACCTCGACGATCCGCGGCCGATCTTCGACTGGCTGCAGGTCATCCGCAAACGCGGCATTGTCTACG TCGGTCTGGATGCGCTGTCCGATGCCGAGGTGGCGGCTGCCGTCGGCAACTCGATGTTTGCCGACCTGGTCTCCGTCGCC GGCCATATCTACAAGCACGGCATTGACCACGGCCTGCCAGGCTCCTCCAGCGCCGCGGACAAGGTGCCGATCAACCTGCA CGCCGATGAGTTCAACGAACTGATGGGCGACGAGTTCATTCCGCTGATCAATAAGGGTGGTGGTGCCGGTATCCAGGTCA CCGCCTATACCCAGACCTTGAGCGACATCGAGGCACGTATCGGCAACCGGGCCAAGGCCGGCCAGGTCATCGGCAACTTC AACACCTTGCAGATGCTACGGGTACGGGAGACCGCAACCGCAGAACTGCTGACCAACCAGTTGCCCAGGGTCAACGTGCA GACCCGCACCCTGGTCTCCGGCGCGACGGACACCGCCGATCCGGATGCCCGCACCGACTTCACCTCCTCCTCGCAGGATC GGGTCACCACCACTTCGGTACCACTGATTGAACCCGCGCACATCATCGCCTTGCCCAAGGGGCAGATGTTCTCTTTCCAG GAGGGAGGACAGCTGTGGAAGGTGCGCATGCCGCTACCGAAGCCGGCTAGCGACGATGCGATGCCGGCGGATCTGCAGGC CCTGGCCGCGCGCATGCGCGAGTCCTACAACGCCAATGCGGGGAGTTGGTGGAGCAGCGCTGGCGGTGCGCCGACGGTCG ATTTTGATCCCGAGATGCCTCCACAAGGGCGCAGGCACTCCTAA Protein sequence : MGEHAMESLLRPAVELYTVGICAGAGALCLHSPWAVALSPEVGAGMALAYTAFGLKRLNEARIVLRYRRNIRRLPRYSLT SRQIPVSGKRLFMGRGFRWTRLHTQRLLEAQDPALARYVNQSAAHQWARRMEQLLEKAPSGLSMLPRLTAWDSPFNPVRP LPPVGGSPLLHGVEPKEQEASLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRPSQEVLIVFDPKGDADLLKRMYVEA RRAGREHEFYVFHLGWPEISARYNAIGRFGRISEVATRIAGQLSGEGNSAAFREFAWRFVNIIARALIELGRRPDYLQIQ RHVVNIDALFIEYAQHFFARHDPQAWEAIVQIEGRLNEKNIPRHMIGREKRVVAIEQYLTAKRIFDPVMDGLRSAVRYDR TYFDKIVASLLPLLEKLTSGKTAQLLAPNYTDLDDPRPIFDWLQVIRKRGIVYVGLDALSDAEVAAAVGNSMFADLVSVA GHIYKHGIDHGLPGSSSAADKVPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGNRAKAGQVIGNF NTLQMLRVRETATAELLTNQLPRVNVQTRTLVSGATDTADPDARTDFTSSSQDRVTTTSVPLIEPAHIIALPKGQMFSFQ EGGQLWKVRMPLPKPASDDAMPADLQALAARMRESYNANAGSWWSSAGGAPTVDFDPEMPPQGRRHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG68 | AAN62290.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 75 |
| ORF C65 | AAN62159.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 75 |
| traG | CAI36113.1 | putative TraG family conjugative protein | Not tested | PPHGI-1 | Protein | 0.0 | 68 |
| EXA47 | ABD94656.1 | TraG/TraD family protein | Not tested | ExoU island A | Protein | 0.0 | 67 |
| unnamed | ABR13375.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 67 |
| RL047 | AAP84173.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 67 |
| YE3493 | YP_001007651.1 | TraG-family protein | Not tested | YAPI | Protein | 0.0 | 63 |
| YpsIP31758_3718 | YP_001402672.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 63 |
| api27 | CAF28501.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 63 |
| PMI2588 | YP_002152307.1 | plasmid transfer protein | Not tested | Not named | Protein | 0.0 | 63 |
| STY4562 | NP_458648.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 61 |
| t4260 | NP_807858.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 61 |
| Pmu_03190 | YP_005176218.1 | conjugal transfer protein TraD | Not tested | ICEPmu1 | Protein | 0.0 | 58 |
| traD | AAW83057.1 | TraD | Not tested | GGI | Protein | 7e-135 | 52 |
