Gene Information

Name : L483_11905 (L483_11905)
Accession : YP_008094167.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2562508 - 2563176 bp
Length : 669 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCTCGAGCTGTGTCTGCGGCTACTCGGCCTGCTGTTCGCTTCGCTGATCTTCTCCATTGTGCTGGAATTCGTGGGCAT
GCTGTGGTTCTGGTCCGAGCAGGGCTGGCATCACAGCCATGCCATGTGGCTGAGTGAGCTAGGCTGGCTCAGCGATCACT
TCAAGAAGTCATTGCTCGTGCAAGAGCCGGCGCAAGCGACCGCCAAGATACTCGAACACCTGAACGACTGGATCGTAGTG
CGCTCTGGATGGGCGACATCTGATACCCAGCTGAAACTGCTCAGTCAGGAACCTTCAATGCAGGGGCAGTTCGCGCAAGT
CTACGTTGTGATGCAGGACTACCTGCTCGCAGCCCTGTTTACGGTCTTCACTTTCGCAGTGCGGCTGGCCGTACTCACTT
TGGCCACCCCACTGTTCTTGCTCGCGGTGATCACCGGCGCGGTCGATGGCTTGATGCGTCGCGACCTGCGTAAGTTCGGA
GCGGGCCGCGAAAGCAGTTTCGTCTACCATCGAGCAAAGCGGACACTATTGCCGCTGGTGGTCAGCCCCTGGGTGATCTA
CTTATCCTTGCCCTGGTCAATGAATCCCATCTGGGTGCTGCTGCCATGCGCCATTTTACTTGGCAGCATGGTGGCCATCA
CTGCTACTACATTCAAAAAATACCTTTGA

Protein sequence :
MLELCLRLLGLLFASLIFSIVLEFVGMLWFWSEQGWHHSHAMWLSELGWLSDHFKKSLLVQEPAQATAKILEHLNDWIVV
RSGWATSDTQLKLLSQEPSMQGQFAQVYVVMQDYLLAALFTVFTFAVRLAVLTLATPLFLLAVITGAVDGLMRRDLRKFG
AGRESSFVYHRAKRTLLPLVVSPWVIYLSLPWSMNPIWVLLPCAILLGSMVAITATTFKKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C64 AAN62158.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-38 50
ORF SG67 AAN62289.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-39 50
pph73 CAI36114.1 hypothetical protein Not tested PPHGI-1 Protein 6e-44 48
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 9e-44 48
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-44 48
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-43 47
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-44 47
STY4563 NP_458649.1 putative membrane protein Not tested SPI-7 Protein 1e-23 43
t4261 NP_807859.1 hypothetical protein Not tested SPI-7 Protein 1e-23 43
PMI2587 YP_002152306.1 hypothetical protein Not tested Not named Protein 7e-27 42