Gene Information

Name : L483_11870 (L483_11870)
Accession : YP_008094160.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2557951 - 2558352 bp
Length : 402 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTCCGAAGCCCCTGCCTCCCTGCCTGACGGCACATTGACCTTCCTCCCGGAGCGACTCAATCGTGACCCGGCCGTCTT
GCGAGGACTCACCAACGACGAGATGTGGGTCGCGCTGATCGTCGGCGCCGGCTTGGGTGTGATCCTCGGTGCACCGCTGG
CGGTGGCCACCGCCTCCATCGCCACCCTCCCCACCTGCATGTTCATCTGCATGGCGTTGGTGTTACTGGGCGGCGGCAAG
CTGATGCGACGGGCCAAGCGCGCCCGCCCCGAAACCTGGCTTTACCGGCGTCTGCAGTGGCACCTGGCAGTGCAATGGGG
TGTCGGCACTAACCAGTTGATCCTGCATTCGGGGCCCTGGACAGTGCGTCGCACGCGTCGACATGTGAGGTCGACGCCAT
GA

Protein sequence :
MSEAPASLPDGTLTFLPERLNRDPAVLRGLTNDEMWVALIVGAGLGVILGAPLAVATASIATLPTCMFICMALVLLGGGK
LMRRAKRARPETWLYRRLQWHLAVQWGVGTNQLILHSGPWTVRRTRRHVRSTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C52 AAN62146.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-14 47
pph79 CAI36120.1 hypothetical protein Not tested PPHGI-1 Protein 2e-12 44
unnamed ABR13367.1 hypothetical protein Not tested PAGI-5 Protein 1e-14 43
EXA38 ABD94647.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-14 43
RL027 AAP84154.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-14 43