|
Name : L483_11860 (L483_11860) Accession : YP_008094158.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : - COG ID : - EC number : - Position : 2556510 - 2557316 bp Length : 807 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGATGCGTGTCTTGATCATGATTCTGACGGTAGCCGCAGGCTGGTGTTCTGCAGTCGGTGCGGTCGAGGTCAAATACTG GGATCGCCTGCCGCTGGCCGTTCCACTTACGGTGGGCCAGGAGCGAGTCCTGATGCTGGATGAGGATGTTCGCGTGGGGG TGCCGGGCACGATCGCCGGAAAGCTGCGTGTACAGTCCGTCGGCGGCACGGTGTATCTGCGCGCCGCTGAAACCCTTCCC CCTACCCGGCTGCAACTGCAGTCGGTGAAGTCAGGCGACATCATCCTGATCGACATCGAGGCGCTTGAGGGCAGCGAGGC GCTGGAGCCGGTCAAGATCGTGGCCCAGGCTCCGGCATCGGAAGTGGACGCTGCGAAGGAGGCGAAACCTGAAGCGACGC CGGTACCGGTGGTGCTCACCCGCTATGCGGCGCAGAACCTCTATGCGCCTCTGCGTACCGTGGCCCCACTGCCCGGTGTG CGGCGGGTGCCGCTGAGCGACCCCGCCGCGTTCAGCATGTTGCTGCCGACCGAACGGGTATCGATCAAGGCACTCGCAGC CTGGCGGCTGGGCGATTACTGGGTGACGGCTGTAAAGATCGTAAACCGCGGCCCCGGCAAAGTCGCGCTCGACCCGCGTC ACCTGCAAGCCACGCTATTCGCCGCAACCTTCCAGCACGCGGACCTCGGTCTCGCCGGCACGCCTGAGGACACCACCGTG GCCTACCTCGTCACCCGTGGCGGCGACTTGAAGCACGCGCTGCTATTGCCCCCGCCAAAACCGGAGGCTGCCAATCATGA AAGCTAA Protein sequence : MMRVLIMILTVAAGWCSAVGAVEVKYWDRLPLAVPLTVGQERVLMLDEDVRVGVPGTIAGKLRVQSVGGTVYLRAAETLP PTRLQLQSVKSGDIILIDIEALEGSEALEPVKIVAQAPASEVDAAKEAKPEATPVPVVLTRYAAQNLYAPLRTVAPLPGV RRVPLSDPAAFSMLLPTERVSIKALAAWRLGDYWVTAVKIVNRGPGKVALDPRHLQATLFAATFQHADLGLAGTPEDTTV AYLVTRGGDLKHALLLPPPKPEAANHES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C50 | AAN62144.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-53 | 56 |
| ORF SG60 | AAN62282.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 9e-48 | 53 |
| RL025 | AAP84152.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-49 | 51 |
| unnamed | ABR13365.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 7e-50 | 51 |
| EXA36 | ABD94645.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 4e-50 | 51 |
| YpsIP31758_3708 | YP_001402662.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-48 | 48 |
| STY4569 | NP_458654.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-48 | 48 |
| t4266 | NP_807864.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-48 | 48 |
| pph81 | CAI36122.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 5e-52 | 47 |
| api36 | CAF28510.1 | hypothetical protein | Not tested | YAPI | Protein | 4e-48 | 47 |
| YE3485 | YP_001007644.1 | hypothetical protein | Not tested | YAPI | Protein | 7e-48 | 47 |
| PMI2580 | YP_002152299.1 | hypothetical protein | Not tested | Not named | Protein | 1e-49 | 46 |
| Pmu_03100 | YP_005176209.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 1e-46 | 42 |
