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Name : gabD (L483_11455) Accession : YP_008094078.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 2472719 - 2474179 bp Length : 1461 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCTCGAACTCAAAGACCCTTCTTTGCTCAAACAACAGGCGTTCATCGACGGCCTCTGGGTGAGTGCCGATTCCGGCGA AACCTTTGCTGTCACCAACCCTGCCACCGGCGAAGAACTGGCGCGCATTCCGCAAATGGGCGCCGCCGAAGCCGAACGCG CGGTGCTGGCTGCGCACCGTGCCTTCAAACCGTGGAAGCGCAAGACCGCCAAGGAGCGCGCCGAGCTGCTGCAGCGCTGG TACGCGCTCATGCTCGAAAATCAGGAGGACCTCGCCCGCCTGCTGACCGCCGAACAAGGCAAGCCACTGGCCGAAGCCCG TGGCGAATTGGGCAACGGCATGTCCTTCGTGCAGTGGTTTGCCGAGGAAGCCAAGCGCGTCTACGGCGACACCATCCCGC AGCCCTCGGCAGACAAGCGCATCATCGTCACCAAGGAGCCGATCGGCGTCACGGCGGCCATCACGCCGTGGAACTTCCCC CACGCGATGATTACCCGCAAGGTGGCCCCGGCCCTGGCCGCCGGTTGCCCGATGGTGCTGCGCCCGGCCAGCCAGACACC ACTGTCGGCCCTGGCCCTGGCGGCCCTGGCCGAACGCGCCGGTATCCCCGCTGGCGTGTTCAGTGTGGTCACCGGCAGCG CGACCCAGATCGGCAGCGTGCTGACCGGCCACCCGCTGGTGCGCAAGTTCAGCTTCACCGGCTCCACGCCGGTGGGCAAG CGGCTGATTGGGCAATGCGCCGAGACCGTGAAGAAGGTGTCCATGGAGCTGGGCGGCAACGCGCCGTTCATTGTCTTCGA TGACGCCGACCTCGACCTGGCCGTGGAAGGCGCGATGCTGTCGAAGTTCCGCAATGCCGGGCAGACCTGCGTCTGCGCCA ACCGTATCTATGTGCAGGACGGTATCTACGAACGGTTTGCCGAGAAGCTCGCCGCTGCTGCCTCGGGCCTGCGCCTGGGT AATGGTGTAGAGGCCGGTGTGACCCAAGGCCCGATGATCGATGAGAACGCCGTGCGCAAGGTCGAAGAGCACATCAGTGA TGCCCTTGAGAAAGGCGCACGGCTGATCGCAGGTGGCCAACGCCACGCGCTGGGTGGCAGCTTCTTCGAGCCGACCGTGC TCACTGAAGTTACGGCGCAGATGAAAGTGGCCCACGAGGAAACGTTCGGGCCACTGGCGCCACTGTTCCGCTTCTCCAGC GAGGACGAGGTGGTCGAGCTGGCCAACGCCACGGAGTTCGGCCTGGCCAGCTACTTCTACAGCCGCGATATCGGCCGCGT GCTGCGCGTCAGCGAAGACCTCGAATACGGCATGGTCGGCGTCAACACTGCGGCAATCGCCAACGAGATGGCGCCGTTCG GAGGCGTCAAGCAATCGGGCCTTGGCCGCGAGGGTTCGCGCTACGGCATCGAAGACTATCTGGAAATCAAGTACGTGTGC CTCGGCGGCGTCGACCGCTAA Protein sequence : MLELKDPSLLKQQAFIDGLWVSADSGETFAVTNPATGEELARIPQMGAAEAERAVLAAHRAFKPWKRKTAKERAELLQRW YALMLENQEDLARLLTAEQGKPLAEARGELGNGMSFVQWFAEEAKRVYGDTIPQPSADKRIIVTKEPIGVTAAITPWNFP HAMITRKVAPALAAGCPMVLRPASQTPLSALALAALAERAGIPAGVFSVVTGSATQIGSVLTGHPLVRKFSFTGSTPVGK RLIGQCAETVKKVSMELGGNAPFIVFDDADLDLAVEGAMLSKFRNAGQTCVCANRIYVQDGIYERFAEKLAAAASGLRLG NGVEAGVTQGPMIDENAVRKVEEHISDALEKGARLIAGGQRHALGGSFFEPTVLTEVTAQMKVAHEETFGPLAPLFRFSS EDEVVELANATEFGLASYFYSRDIGRVLRVSEDLEYGMVGVNTAAIANEMAPFGGVKQSGLGREGSRYGIEDYLEIKYVC LGGVDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-155 | 65 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 8e-84 | 42 |
