Gene Information

Name : L483_10860 (L483_10860)
Accession : YP_008093959.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2350425 - 2351945 bp
Length : 1521 bp
Strand : +
Note : catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGATCTACGCACAACCCGGAACCCCAGGCGCCGTCGTGTCCTTCAAGCCACGTTATGGCAACTTCATCAATGGCGAGTT
CGTGCAGCCGTTGGCTGGCCAGTACTTCACCAACAGCTCGCCGGTCAATGGCCAGCCGATTGCCGAGTTCCCGCGTTCCA
CTGCCCAGGACGTCGACCGCGCCCTGGACGCCGCGCACGCAGCCGCCGAAGCCTGGGGCAAGACCTCGGTGCAAGACCGC
GCCCTGGTGCTGCTGAAGATTGCCGACCGTATCGAACAGAACCTGGAAGTGCTGGCCGTCACCGAAAGCTGGGACAACGG
CAAGGCGGTGCGCGAAACGCTCAATGCCGACGTGCCGCTGGCAGCGGACCACTTCCGCTATTTTGCCGGTTGCATCCGAG
CCCAGGAGGGCGGCGCGGCCGAAATCAACGAGGGCACCGTGGCTTATCACATCCATGAGCCGCTGGGCGTGGTCGGGCAG
ATCATCCCCTGGAACTTCCCGCTGCTGATGGCTGCCTGGAAGCTTGCCCCGGCCCTGGCCGCCGGCAACTGTGTGGTGCT
CAAGCCGGCCGAGCAGACGCCTCTGTCGATCACCATTTTTGCCGAGCTGGTCGCCGACCTGCTGCCGGCGGGCGTGTTGA
ACATCGTCCAGGGCTTCGGCCGTGAGGCCGGCGAAGCGCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTTACCGGC
TCTACGCCTGTGGGGTCGCACATCATGAAGTGCGCGGCCGAGAACATCATCCCGTCCACCGTCGAACTGGGCGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAGCCCGCGTTCATCGAGAAGGCCGCCGAGGGCCTGGTGCTGGCGT
TCTTCAACCAGGGCGAAGTATGCACCTGCCCGTCCCGGGCGCTGATCCAGGAATCGATCTACCAGCCATTCATGGCCGAG
GTGATGAAGAAGATCGCCAAGATAACGCGGGGCAACCCGCTGGACACCGAAACCATGGTGGGTGCCCAGGCCTCGGAGCA
GCAATACGACAAGATTCTGTCCTATCTGCAGATTGCCAAGGAGGAGGGCGCGCAGCTGCTCACCGGCGGCGGTGCCGAGC
AGCTGCAGGGCGACCTGGGCAGCGGTTACTACATCCAGCCGACCCTGCTCAAAGGCAACAACAAGATGCGTGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCAATTGCCAACGACACCGA
GTTTGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCCTACCGCATGGGGCGCGGCATCAAGGCCGGCCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCAGCGTTTGGCGGCTACAAGAAGTCTGGCGTGGGCCGTGAAACC
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTATTGGTAAGCTACGACATCAACCCGCTGGGCTTTTTCTA
G

Protein sequence :
MIYAQPGTPGAVVSFKPRYGNFINGEFVQPLAGQYFTNSSPVNGQPIAEFPRSTAQDVDRALDAAHAAAEAWGKTSVQDR
ALVLLKIADRIEQNLEVLAVTESWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSITIFAELVADLLPAGVLNIVQGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALIQESIYQPFMAE
VMKKIAKITRGNPLDTETMVGAQASEQQYDKILSYLQIAKEEGAQLLTGGGAEQLQGDLGSGYYIQPTLLKGNNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEFGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-150 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-157 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-157 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-157 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-156 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_10860 YP_008093959.1 aldehyde dehydrogenase VFG0082 Protein 3e-150 66