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Name : ssuB (L483_00940) Accession : YP_008092043.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Resistance Product : aliphatic sulfonate ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 210806 - 211618 bp Length : 813 bp Strand : + Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: DNA sequence : ATGACCGTGCTCAAGGAACAGCCGCCACGCCTGTTGCGTGGCATCCCGCTGGCCTCCAACGGCCTGCGCAAGACCTTTGG CCAGCGCGAAGTGTTGAGGGGCATCGACCTGCACATTCCGGCGGGGCAGTTCGTTGCCATCGTCGGCCGCAGCGGCTGCG GCAAAAGCACCCTGCTGCGGCTGCTGGCCGGGCTCGACCAGCCTACGGCCGGGCAGTTGCTGGCCGGCGCTGCGCCGCTG GAAGAGGCCCGCGAAGAAACCCGCCTGATGTTCCAGGACGCACGCTTGCTGCCCTGGAAGAAGGTGATCGACAACGTTGG CCTGGGCCTGTCGGGTGACTGGCGCCCACGTGCGCTGGAAGCGCTGGAGGCGGTTGGCCTGGCCGACCGCGCCAATGAAT GGCCGGCAGCCCTGTCGGGTGGCCAAAAACAGCGCGTGGCCCTGGCGCGGGCGCTGATCCACCAGCCACGCCTGCTGCTG CTGGACGAGCCGCTGGGTGCGCTGGATGCATTGACCCGTATCGAGATGCAGCAACTGATAGAACGCCTGTGGCGTCAGCA CGGCTTCACCGTGCTGCTGGTCACTCACGATGTCAGCGAGGCGGTAGCCGTGGCTGACCGGGTGATCCTGATCGAGGACG GCGAGGTCGGGCTCGACCTCACCGTCGACCTGGCACGGCCCCGCGCGCGTGGTTCGCACCGCCTGGCCGCGCTGGAAAGC GAAGTGCTCAACCGTGTTCTGTCGGCCCCGGGCACTGCGCCCGAGCCGGATCCTGTAGCCCCTCTGCCCACGCAGCTGCG CTGGGCACACTGA Protein sequence : MTVLKEQPPRLLRGIPLASNGLRKTFGQREVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGLDQPTAGQLLAGAAPL EEAREETRLMFQDARLLPWKKVIDNVGLGLSGDWRPRALEALEAVGLADRANEWPAALSGGQKQRVALARALIHQPRLLL LDEPLGALDALTRIEMQQLIERLWRQHGFTVLLVTHDVSEAVAVADRVILIEDGEVGLDLTVDLARPRARGSHRLAALES EVLNRVLSAPGTAPEPDPVAPLPTQLRWAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 4e-37 | 47 |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-21 | 43 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-23 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 4e-23 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 4e-23 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ssuB | YP_008092043.1 | aliphatic sulfonate ABC transporter ATP-binding protein | NC_008702.1.4606598. | Protein | 7e-16 | 41 |
