Gene Information

Name : L483_09350 (L483_09350)
Accession : YP_008093662.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1997077 - 1997760 bp
Length : 684 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGGCCCCAACATACTCGTTGCGCAGAACCTTAGCAAAGTGGTCCCCAGCGCGGAAGGTGACCTTACCATCCTCCACGC
ACTCTCCCTCGAGCTGGCCAAAGGCGACAGCCTGGCCATCGTCGGCGCCTCGGGCTCGGGCAAGTCGACCCTGCTCGGCC
TACTCGCCGGCCTCGACCAGCCCAGCGCGGGCAAAGTCCTCCTCGCCGGCACCGACCTGGGGCCACTGGATGAAGACCAG
CGCGCCCGGGTACGTGCCGAACATGTGGGCTTTGTGTTCCAGTCATTCCAGCTGCTCGACAGCCTGAATGCGCTGGAGAA
CGTGATGCTGCCACTGGAACTGGACGGCCGCCGCGACGCCCGCGAACAGGCGCGCAGCCTGCTGGAACGGGTCGGCCTGG
GCAAGCGCCTGAGCCACACCCCGCGCCAACTGTCGGGCGGCGAACAGCAGCGGGTAGCCATCGCCCGCGCCTTCGCCGCG
CAGCCTGCGGTGTTGTTTGCCGACGAACCCACCGGCAACCTCGACAGCCACACAGGCGAGCGCATCAGCGACTTGTTGTT
TGAACTGAACAAAGAGCGCGGTACTACCCTGGTGCTGGTCACCCATGACGAACGCCTGGCCCGACGCTGCCGCCGCCAGA
TCCGCCTGGATGCGGGGCGCTTGGTGGCCCCGGTGGAGGCTTGA

Protein sequence :
MGPNILVAQNLSKVVPSAEGDLTILHALSLELAKGDSLAIVGASGSGKSTLLGLLAGLDQPSAGKVLLAGTDLGPLDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRRDAREQARSLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAA
QPAVLFADEPTGNLDSHTGERISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRLVAPVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-22 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_09350 YP_008093662.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-29 51
L483_09350 YP_008093662.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-31 46
L483_09350 YP_008093662.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 9e-17 41
L483_09350 YP_008093662.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-24 41