Gene Information

Name : L483_08020 (L483_08020)
Accession : YP_008093409.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1747122 - 1747820 bp
Length : 699 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAGTGAGTCGCGCATGAGTGATAAAGCCGTTCTGAGTTGCCGCAACCTGGGCAAGTCTTACGACGAAGGCCCGGAATC
GGTGAAGGTGCTATCCGGGCTCAACCTTGAGCTGCATGCCGGTGAGCGGGTGGCCATTGTCGGTAGCTCCGGTTCGGGCA
AGAGTACCTTGCTCAACCTGTTGGGCGGCCTTGATCGGCCCACACAAGGCAGCGTATGGCTGGCTGGCGAAGAGCTGTCG
GCCCTGGGTGAACGTGCCCGTGGCCTGCTGCGCAACCGTGAGCTGGGCTTTGTCTACCAGTTCCACCACCTGTTGCCGGA
ATTCACCGCCATCGAGAACGTGTGCATGCCGCTGCTGATCGGCCGCACGCCCATCCCTGAGGCCCGGGAACGTGCCGAGG
CGCTGCTCAAGCGGGTGGGCCTGGGCCACCGCCTGAACCACAAGCCGGCCGAATTGTCTGGTGGTGAGCGCCAGCGGGTG
GCGATTGCCCGGGCACTCGTCAACCGCCCAGGCCTGGTGATGCTCGATGAGCCTACCGGCAACCTCGACCACCATACCGC
ACAAGGCATCCAGGAACTGATGCAGGAGCTGTCCAGTTCGTCGCGCACGGCGTTCCTGGTGGTGACCCATGACCTCAACC
TGGCGCGGCAGATGGACCGTGTATTGAAGCTCGACGACGGCCACCTGGTGGCGATCTGA

Protein sequence : 
MSESRMSDKAVLSCRNLGKSYDEGPESVKVLSGLNLELHAGERVAIVGSSGSGKSTLLNLLGGLDRPTQGSVWLAGEELS
ALGERARGLLRNRELGFVYQFHHLLPEFTAIENVCMPLLIGRTPIPEARERAEALLKRVGLGHRLNHKPAELSGGERQRV
AIARALVNRPGLVMLDEPTGNLDHHTAQGIQELMQELSSSSRTAFLVVTHDLNLARQMDRVLKLDDGHLVAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_08020 YP_008093409.1 ABC transporter NC_008702.1.4606598. Protein 8e-36 45
L483_08020 YP_008093409.1 ABC transporter NC_012469.1.7686878. Protein 5e-38 44