Gene Information

Name : L483_00765 (L483_00765)
Accession : YP_008092008.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Unknown
Product : spermidine/putrescine ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 168938 - 169801 bp
Length : 864 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACGCATTCAACACGGCCCACCTGCAGGCGGCCAACCAGCCCAACAGCACCCCGCCTCTGGTCAGCTTCGAGGGGGT
CGGCAAGGTGTTCAGCGTGGACGGCCAGCCGTTCGAAGCTATCCGCAACTTCAACCTGTCGATCAACGAAGGTGAGTTCA
TTGCCATCGTCGGCGCATCCGGTTGTGGCAAATCCACCTTGCTGCGCTTGCTGGTGGGGCTTGATACCGAATACAGCGGC
AGCATCCGTGTCGACGGCCAAGCAGTCAGCGGCATTGGTGGCGAACGCGGCATCGTGTTCCAGGAGCACCGGCTGTTCCC
GTGGTTGAACGTGGAACAGAACATTGCCTTGGGGCTGGTCAACGAGTCGCTCACCCAGGGTGAACGCGCCAGGCGGGTGC
ATGAATTCGTGCAACTGGTGGGACTGGTCGGCTTCGAGTCGGCCTATCCACACCAGCTATCGGGCGGCATGGCGCAGCGC
GTGGCGATCGCCCGTGGCCTTGTGGCCAGCCCGCGTATCCTGCTGCTCGACGAGCCGTTCGGCGCCCTGGATGCTCTGAC
CCGCCAGCAACTGCAAGACGAGCTGCTGGCCATTCGCGAACGAGCAGGTATCACAACTTTGCTGGTGACCCACGATGCCG
AGGAGGCAACATACCTGGCTGATCGGGTTGTGGTGCTGGAGCCACGCCCGGGCAGGATCAAATCGGTGGTCGAGATAGAC
CTGCCACACCCGCGGTTACGTACGGGTGTGGCACTGCATGGGCTGCGCGAAAAGGTGCTGCACCAGATCACCGGGGATGG
CGGTTACCTGCCACCGCCGGGGCGACGGGTGGAAGGGCTGCGGCCGGAGCTGATTGCATTGTGA

Protein sequence :
MNAFNTAHLQAANQPNSTPPLVSFEGVGKVFSVDGQPFEAIRNFNLSINEGEFIAIVGASGCGKSTLLRLLVGLDTEYSG
SIRVDGQAVSGIGGERGIVFQEHRLFPWLNVEQNIALGLVNESLTQGERARRVHEFVQLVGLVGFESAYPHQLSGGMAQR
VAIARGLVASPRILLLDEPFGALDALTRQQLQDELLAIRERAGITTLLVTHDAEEATYLADRVVVLEPRPGRIKSVVEID
LPHPRLRTGVALHGLREKVLHQITGDGGYLPPPGRRVEGLRPELIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-51 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 41