|
Name : L483_07030 (L483_07030) Accession : YP_008093225.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : - COG ID : - EC number : 2.7.7.38 Position : 1524072 - 1524836 bp Length : 765 bp Strand : + Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; Derived by automated computational analysis using gene prediction method: DNA sequence : ATGAGCCTGGACTTCACCGTGGTGATTCCCGCCCGGTTGCGCTCCACACGGCTCCCAGGCAAGCCGCTGCTGCCGATTGC CGGCAAGCCGATGGTGCAACACGTGTGGGAGCAGGCACGCAAAAGTGCCGCGAGCCGTGTGGTTATCGCCACCGATGACG CCAGTATCTTCGAGGCCTGCCAGGCGTTCGGCGCCGAAGTGCTGATGACCCGCGCCGACCATGAATCGGGCACCGACCGC CTGGCCGAAGTGGCTGTGCACCTGGGCTTGCCGGCTGATGCCATCGTGGTCAACGTGCAGGGCGACGAGCCGCTGATCCC GCCGGTGATCATCGACCAGGTGGCGGCCAACCTGGCTGCGCATCCAGAGGCCGGCATCGCTACTCTGGCCGAGCCGATCC ATGAGCCGGAAACCGTGTTCAACCCCAATGCAGTCAAGGTGGTGAGCGACAAGAACGGACTGGCCCTGACTTTCAGCCGT GCGCCGCTGCCGTGGGCCCGCGATGGCTTTGCCAGCGACCGCAATGTGCTGCCCGAAGGCGTGCCGTATCGCCGCCACAT CGGCATGTACGCCTACCGCGTCGGCTTTCTGCAGGACTTTGTCGGTTGGGGCCCATGCTGGCTTGAACAGACCGAAGCGC TGGAGCAACTGCGTGCCTTGTGGCACGGCGTGCGCATTCACGTCGAGGACGCCATCGAGGCGCCAGCCGTAGGCGTTGAT ACCCCTGAAGACCTGGAGCGCGTACGGCGCTTGCTGGAGGCTTGA Protein sequence : MSLDFTVVIPARLRSTRLPGKPLLPIAGKPMVQHVWEQARKSAASRVVIATDDASIFEACQAFGAEVLMTRADHESGTDR LAEVAVHLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSR APLPWARDGFASDRNVLPEGVPYRRHIGMYAYRVGFLQDFVGWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVD TPEDLERVRRLLEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-38 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 1e-38 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 7e-39 | 44 |
