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Name : xerD (L483_05220) Accession : YP_008092870.1 Strain : Pseudomonas putida H8234 Genome accession: NC_021491 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : - COG ID : - EC number : - Position : 1134214 - 1135110 bp Length : 897 bp Strand : + Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGCCCGCCCTAGACCACCCCCTGATCGACCAGTTTCTCGACGCCCTGTGGCTTGAAAAAGGCCTGTCCGACAACACCCG CGTGTCTTATCGCAGCGATCTGGCGCTGTTTAATGGCTGGCTGCAGGAGCATTCGGTTTCCCTGCCCGACGCCGGCCGTG ACCTGATCCTCGACCACCTCGCCTGGCGCCTCGATCAGGGCTATAAGCCACGCTCCACGGCGCGCTTTCTGTCCGGCCTG CGGGGTTTCTTCCGCTACCTGCTGCGCGAGAAGCTGGTGGCGATTGACCCGACCCTGCAGGTCGAGATGCCGCAACTGGG CAAGCCGCTGCCCAAGTCGTTGTCCGAAGCTGACGTTGAAGCCTTGCTGCAGGCCCCGGACCTGGGTGAAGCCATCGGCC AGCGTGACCGCGCCATGCTCGAAGTGCTGTATGCCTGCGGTCTGCGCGTCACCGAACTGGTCAGCCTGACCCTTGACCAG ATCAACCTGCGCCAAGGTGTGCTTCGGGTGATGGGCAAGGGCAGCAAAGAGCGCCTGGTGCCCATGGGCGAAGAGGCAGT AGTGTGGCTGGAGCGCTACCAGCGCGATGGCCGCGCCGAGTTGCTCAATGGCCGCCCCAGCGACGTGCTGTTCCCCAGCC AGCGCGGCGAACAGATGACCCGCCAGACCTTCTGGCACCGCATCAAGCACCATGCCCGGGTGGCAGGTATCGACAAACCG CTGTCGCCACACACGCTGCGCCATGCCTTTGCCACTCACCTGCTCAACCATGGGGCCGACCTGCGCGTGGTCCAGATGCT GCTCGGCCACAGCGACCTCTCGACCACTCAGATCTACACCCACGTGGCCAAAGCCCGCCTGCAGCAGTTGCACGCACAGC ATCACCCACGTGGATGA Protein sequence : MPALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLAWRLDQGYKPRSTARFLSGL RGFFRYLLREKLVAIDPTLQVEMPQLGKPLPKSLSEADVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQ INLRQGVLRVMGKGSKERLVPMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKP LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 7e-67 | 63 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 7e-67 | 63 |
