Gene Information

Name : L483_05090 (L483_05090)
Accession : YP_008092844.1
Strain : Pseudomonas putida H8234
Genome accession: NC_021491
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1110899 - 1111333 bp
Length : 435 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCAGCATCGACGTAACCGCCAGCGCGGTTTCACCCTCATGGAAATCATGGTGGTGATCTTCATCATCGGCCTGCTGAT
CGCCGTGGTTGCACCCAGCGTGCTGGGCAACCAGGACAAAGCCATGAAGCAGAAGGTAATGGCCGACCTGGCCACCCTGG
AGCAGGCGCTGGACATGTACCGGCTGGACAACCTGCGCTTCCCCAGCAGCGAGCAGGGCCTGGCCGCACTGGTGAAAAAA
CCTAGCCAGGAACCGCTGCCGCGGGCCTGGCGCAGCGACGGCTATGTGCGACGCCTGCCGCAAGACCCGTGGGGCACCCC
GTACCAGTACCGCATGCCCGGTGAACATGGCCGGGTTGATGTGTACTCGCTGGGTGCCGATGGCCAGCCAGGCGGCGAAG
GCCAGGATGCCGACCTGGGTAACTGGGCGCTGTAA

Protein sequence : 
MQHRRNRQRGFTLMEIMVVIFIIGLLIAVVAPSVLGNQDKAMKQKVMADLATLEQALDMYRLDNLRFPSSEQGLAALVKK
PSQEPLPRAWRSDGYVRRLPQDPWGTPYQYRMPGEHGRVDVYSLGADGQPGGEGQDADLGNWAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-38 55
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-38 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
L483_05090 YP_008092844.1 general secretion pathway protein G VFG2050 Protein 8e-39 55
L483_05090 YP_008092844.1 general secretion pathway protein G VFG0180 Protein 7e-37 54
L483_05090 YP_008092844.1 general secretion pathway protein G VFG1871 Protein 1e-34 50